RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 SMC3Q9UQE7 1217 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 INVSQ9Y283 1065 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 PPME1Q9Y570 386 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 PTPRBP23467 1997 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 MAFO75444 373 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-217ENST00000548420 MAPK8P45983 427 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-217ENST00000548420 RAB33AQ14088 237 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 SYNPOQ8N3V7 929 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 MSANTD3Q96H12 275 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 HHIPQ96QV1 700 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 LXNQ9BS40 222 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 CLMPQ9H6B4 373 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 IFT122Q9HBG6 1241 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 SNTG2Q9NY99 539 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 SEPT9Q9UHD8 586 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-217ENST00000548420 HES2Q9Y543 173 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 ADAMTS9Q9P2N4 1935 aa15.42■□□□□ 0.06
PTCH1-217ENST00000548420 A0A087WV48 116 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 HEPACAM2A8MVW5 462 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 UPK3BL1B0FP48 263 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 UPK3BL2E5RIL1 263 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 PTPN2P17706 415 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 GNL2Q13823 731 aaKnown RBP15.41■□□□□ 0.06
PTCH1-217ENST00000548420 ZNF423Q2M1K9 1284 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 PMS2CLQ68D20 193 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 PNPLA1Q8N8W4 532 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
PTCH1-217ENST00000548420 CSGALNACT1Q8TDX6 532 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 HASPINQ8TF76 798 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 INTS4Q96HW7 963 aaKnown RBP15.41■□□□□ 0.06
PTCH1-217ENST00000548420 TTPALQ9BTX7 342 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 DHX33Q9H6R0 707 aaKnown RBP15.41■□□□□ 0.06
PTCH1-217ENST00000548420 MINDY3Q9H8M7 445 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 GTSE1Q9NYZ3 720 aa15.41■□□□□ 0.06
PTCH1-217ENST00000548420 MBD1Q9UIS9 605 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-217ENST00000548420 NOL7Q9UMY1 257 aaKnown RBP15.41■□□□□ 0.06
PTCH1-217ENST00000548420 PTPRQQ9UMZ3 2332 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 ZBTB39O15060 712 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 SPATA31C1P0DKV0 1188 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 XRCC6P12956 609 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTCH1-217ENST00000548420 ITGA4P13612 1032 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 GJA1P17302 382 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
PTCH1-217ENST00000548420 OR1D2P34982 312 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 NPEPPSP55786 919 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 CDC42EP1Q00587 391 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 CTTNQ14247 550 aaKnown RBP15.4■□□□□ 0.06
PTCH1-217ENST00000548420 FAM171A1Q5VUB5 890 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 C1orf228Q6PIY5 440 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 PCSK4Q6UW60 755 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 OTUD6AQ7L8S5 288 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 RALGPS2Q86X27 583 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-217ENST00000548420 CEP57Q86XR8 500 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 TPH2Q8IWU9 490 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 ADAMTS14Q8WXS8 1223 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 SNX21Q969T3 373 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 LRRC3BQ96PB8 259 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 CORO1BQ9BR76 489 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 APOL6Q9BWW8 343 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
PTCH1-217ENST00000548420 TRPV4Q9HBA0 871 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
PTCH1-217ENST00000548420 SLC8A2Q9UPR5 921 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 IPPQ9Y573 584 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 COL6A6A6NMZ7 2263 aa15.4■□□□□ 0.06
PTCH1-217ENST00000548420 CHADO15335 359 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 TADA2AO75478 443 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTCH1-217ENST00000548420 CYP4A11Q02928 519 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 PDIA5Q14554 519 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 NBR1Q14596 966 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 PLA2G4FQ68DD2 849 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 ZNF410Q86VK4 478 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 RHPN2Q8IUC4 686 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 GPIHBP1Q8IV16 184 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 EXOC8Q8IYI6 725 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 CAMKK1Q8N5S9 505 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 ZFYVE19Q96K21 471 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 JPH2Q9BR39 696 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-217ENST00000548420 POLR3CQ9BUI4 534 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-217ENST00000548420 INO80BQ9C086 356 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-217ENST00000548420 ANKEF1Q9NU02 776 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 DKK4Q9UBT3 224 aa15.39■□□□□ 0.05
PTCH1-217ENST00000548420 EVLQ9UI08 416 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-217ENST00000548420 H3BQV1 296 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 LAD1O00515 517 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 NR1I2O75469 434 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 MICAL2O94851 1124 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 ENGP17813 658 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 BCKDHBP21953 392 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 IGFBP6P24592 240 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-217ENST00000548420 GBP1P32455 592 aa15.38■□□□□ 0.05
PTCH1-217ENST00000548420 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms