RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 NT5DC1Q5TFE4 455 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 ATF7IP2Q5U623 682 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 TXNDC11Q6PKC3 985 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 WDR5BQ86VZ2 330 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 CATSPER3Q86XQ3 398 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 YAF2Q8IY57 180 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 CEP120Q8N960 986 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 C12orf50Q8NA57 414 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-208ENST00000546534 SHKBP1Q8TBC3 707 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 MSANTD3Q96H12 275 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 KIFC3Q9BVG8 833 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 SLITRK6Q9H5Y7 841 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 ASAH2Q9NR71 780 aa13.99□□□□□ -0.17
SCAF11-208ENST00000546534 STK36Q9NRP7 1315 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 MYBPHLA2RUH7 354 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 CHADO15335 359 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 NEMFO60524 1076 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 MED24O75448 989 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 ZNF806P0C7X5 589 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 COL9A2Q14055 689 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-208ENST00000546534 XKR4Q5GH76 650 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 DGKKQ5KSL6 1271 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 STPG1Q5TH74 334 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 C1orf228Q6PIY5 440 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 ALKAL1Q6UXT8 129 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 GPIHBP1Q8IV16 184 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 LEMD2Q8NC56 503 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 TTC8Q8TAM2 541 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 ZMAT2Q96NC0 199 aaKnown RBP13.98□□□□□ -0.17
SCAF11-208ENST00000546534 MTMR9Q96QG7 549 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 NACC1Q96RE7 527 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 POLD4Q9HCU8 107 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 AFF4Q9UHB7 1163 aaKnown RBP13.98□□□□□ -0.17
SCAF11-208ENST00000546534 BAHCC1Q9P281 2608 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 RALGAPA1Q6GYQ0 2036 aa13.98□□□□□ -0.17
SCAF11-208ENST00000546534 ATRXP46100 2492 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 PROS1P07225 676 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 CYP11B2P19099 503 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 CTHP32929 405 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 KRT2P35908 639 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 GRM5P41594 1212 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 YARSP54577 528 aaKnown RBP13.97□□□□□ -0.17
SCAF11-208ENST00000546534 OSTNP61366 133 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 PON2Q15165 354 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 RNF19BQ6ZMZ0 732 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 RALGPS2Q86X27 583 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-208ENST00000546534 LOXL4Q96JB6 756 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-208ENST00000546534 CDT1Q9H211 546 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 SH2B1Q9NRF2 756 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-208ENST00000546534 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-208ENST00000546534 NUB1Q9Y5A7 615 aa13.97□□□□□ -0.17
SCAF11-208ENST00000546534 ARHGEF35A5YM69 484 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 EXTL3O43909 919 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 REC8O95072 547 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 EPN2O95208 641 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 KCNK5O95279 499 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 RAP1GAPP47736 663 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 PXNP49023 591 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-208ENST00000546534 EFNA5P52803 228 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 CCINQ13939 588 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 PPP2R5AQ15172 486 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 ZNF280DQ6N043 979 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 APBB1IPQ7Z5R6 666 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-208ENST00000546534 KBTBD6Q86V97 674 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 ARID3BQ8IVW6 561 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-208ENST00000546534 FAM200AQ8TCP9 573 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 GAB3Q8WWW8 586 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 C18orf25Q96B23 403 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-208ENST00000546534 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 SUSD3Q96L08 255 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 LRRC3Q9BY71 257 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 TMEM60Q9H2L4 133 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 SMOC1Q9H4F8 434 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 PDRG1Q9NUG6 133 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 GTSE1Q9NYZ3 720 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-208ENST00000546534 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-208ENST00000546534 MAFFQ9ULX9 164 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 TNFSF13BQ9Y275 285 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 YIPF1Q9Y548 306 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 PCDHGA4Q9Y5G9 962 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 CEP295Q9C0D2 2601 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 FAM208BQ5VWN6 2430 aa13.96□□□□□ -0.17
SCAF11-208ENST00000546534 A0A1W2PRU2 124 aa13.95□□□□□ -0.18
SCAF11-208ENST00000546534 RPP40O75818 363 aaKnown RBP13.95□□□□□ -0.18
SCAF11-208ENST00000546534 CTDNEP1O95476 244 aa13.95□□□□□ -0.18
SCAF11-208ENST00000546534 CPB1P15086 417 aa13.95□□□□□ -0.18
SCAF11-208ENST00000546534 RPL9P32969 192 aaKnown RBP13.95□□□□□ -0.18
SCAF11-208ENST00000546534 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
SCAF11-208ENST00000546534 CACNA2D4Q7Z3S7 1137 aa13.95□□□□□ -0.18
SCAF11-208ENST00000546534 TMC8Q8IU68 726 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms