RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 LCHNA4D1U4 455 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 NT5C1B-RDH14C9J2C7 533 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 GJB5O95377 273 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 CALCAP01258 141 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
CADM1-220ENST00000546000 CASP14P31944 242 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 BRCC3P46736 316 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 RABGGTBP53611 331 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 SGSM1Q2NKQ1 1148 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 LRRC52Q8N7C0 313 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 BAP1Q92560 729 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 PDLIM2Q96JY6 352 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 ZNF560Q96MR9 790 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
CADM1-220ENST00000546000 SLC9A7Q96T83 725 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 NAA15Q9BXJ9 866 aaKnown RBP18.28■□□□□ 0.52
CADM1-220ENST00000546000 MRPL9Q9BYD2 267 aaKnown RBP18.28■□□□□ 0.52
CADM1-220ENST00000546000 IMPG2Q9BZV3 1241 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 GPR88Q9GZN0 384 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 TSC2P49815 1807 aa18.28■□□□□ 0.52
CADM1-220ENST00000546000 ARHGEF15O94989 841 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 TAF6P49848 677 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 ADKP55263 362 aaKnown RBP18.27■□□□□ 0.52
CADM1-220ENST00000546000 CDH8P55286 799 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 CUL2Q13617 745 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 BTG3Q14201 252 aaPredicted RBP18.27■□□□□ 0.52
CADM1-220ENST00000546000 WDR72Q3MJ13 1102 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 ZNF667Q5HYK9 610 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 ANP32BQ92688 251 aaKnown RBP18.27■□□□□ 0.52
CADM1-220ENST00000546000 GDF15Q99988 308 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 UBE2OQ9C0C9 1292 aaKnown RBP18.27■□□□□ 0.52
CADM1-220ENST00000546000 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
CADM1-220ENST00000546000 CEP72Q9P209 647 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 HMGXB4Q9UGU5 601 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 R3HCC1Q9Y3T6 440 aaKnown RBP18.27■□□□□ 0.52
CADM1-220ENST00000546000 SNX9Q9Y5X1 595 aa18.27■□□□□ 0.52
CADM1-220ENST00000546000 LRRC53A6NM62 1247 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 NRP1O14786 923 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 HCRTO43612 131 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 MFAP3LO75121 409 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 B3GAT3O94766 335 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 MYOGP15173 224 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 CD58P19256 250 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 ATICP31939 592 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 LILRA4P59901 499 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 HTRA4P83105 476 aaPredicted RBP18.26■□□□□ 0.51
CADM1-220ENST00000546000 ORC1Q13415 861 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 DRAP1Q14919 205 aaPredicted RBP18.26■□□□□ 0.51
CADM1-220ENST00000546000 PDXDC1Q6P996 788 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 SPRED2Q7Z698 418 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 PPFIBP1Q86W92 1011 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 CMTR2Q8IYT2 770 aaKnown RBP18.26■□□□□ 0.51
CADM1-220ENST00000546000 CCDC150Q8NCX0 1101 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 MRPL45Q9BRJ2 306 aaKnown RBP18.26■□□□□ 0.51
CADM1-220ENST00000546000 ZBED2Q9BTP6 218 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 VRTNQ9H8Y1 702 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 L1RE1Q9UN81 338 aa18.26■□□□□ 0.51
CADM1-220ENST00000546000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.26■□□□□ 0.51
CADM1-220ENST00000546000 GBF1Q92538 1859 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 F8VZ95 297 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 STAU1O95793 577 aaKnown RBP18.25■□□□□ 0.51
CADM1-220ENST00000546000 GALTP07902 379 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 RPL9P32969 192 aaKnown RBP18.25■□□□□ 0.51
CADM1-220ENST00000546000 JAM2P57087 298 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 TNNC1P63316 161 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 MYO1EQ12965 1108 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 SV2CQ496J9 727 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 FIGNQ5HY92 759 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
CADM1-220ENST00000546000 CACNA2D4Q7Z3S7 1137 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 OSTM1Q86WC4 334 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 UBR7Q8N806 425 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 TAF4BQ92750 862 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 UROC1Q96N76 676 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 MMS19Q96T76 1030 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 MTIF3Q9H2K0 278 aaKnown RBP18.25■□□□□ 0.51
CADM1-220ENST00000546000 CAPN11Q9UMQ6 739 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 NME7Q9Y5B8 376 aa18.25■□□□□ 0.51
CADM1-220ENST00000546000 TIMM13Q9Y5L4 95 aaPredicted RBP18.25■□□□□ 0.51
CADM1-220ENST00000546000 A0A1W2PQJ5 194 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 KPNA7A9QM74 516 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 TLL1O43897 1013 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 LINC00271P0C7V0 271 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 ACO1P21399 889 aaKnown RBP18.24■□□□□ 0.51
CADM1-220ENST00000546000 KRT9P35527 623 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 PNPLA4P41247 253 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 AARSP49588 968 aaKnown RBP eCLIP18.24■□□□□ 0.51
CADM1-220ENST00000546000 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 TRIM14Q14142 442 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 CCDC186Q7Z3E2 898 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 TC2NQ8N9U0 490 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 DDX27Q96GQ7 796 aaKnown RBP18.24■□□□□ 0.51
CADM1-220ENST00000546000 SENP8Q96LD8 212 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 NUP58Q9BVL2 599 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 BCO2Q9BYV7 579 aa18.24■□□□□ 0.51
CADM1-220ENST00000546000 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms