RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 BAIAP2L1Q9UHR4 511 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 ARL2BPQ9Y2Y0 163 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 STYXL1Q9Y6J8 313 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 CDH16O75309 829 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 CLTAP09496 248 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 TCF4P15884 667 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 TNNI1P19237 187 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 TAC1P20366 129 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 PIK3CAP42336 1068 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 ACOT2P49753 483 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 ADCY1Q08828 1119 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 CUL2Q13617 745 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 NEDD9Q14511 834 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 STAT4Q14765 748 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 CCDC142Q17RM4 750 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 WDR44Q5JSH3 913 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 LIN9Q5TKA1 542 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 ZNF365Q70YC5 407 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 RPAINQ86UA6 219 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 SRRM1Q8IYB3 904 aaKnown RBP16.21■□□□□ 0.19
CNN3-207ENST00000545882 BBOF1Q8ND07 529 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 ZBTB45Q96K62 511 aaPredicted RBP16.21■□□□□ 0.19
CNN3-207ENST00000545882 RMDN2Q96LZ7 410 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
CNN3-207ENST00000545882 SEPT9Q9UHD8 586 aaPredicted RBP16.21■□□□□ 0.19
CNN3-207ENST00000545882 USTQ9Y2C2 406 aa16.21■□□□□ 0.19
CNN3-207ENST00000545882 NFASCO94856 1347 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 VWA5AO00534 786 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 IBSPP21815 317 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 CCND2P30279 289 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 SLC8A1P32418 973 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 STX2P32856 288 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 MAGEA4P43358 317 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 WDR4P57081 412 aaKnown RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 COPS2P61201 443 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 ZKSCAN8Q15776 578 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 P3H1Q32P28 736 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 ZBTB41Q5SVQ8 909 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 MIS18BP1Q6P0N0 1132 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 PNMA8AQ86V59 439 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 ATP6V0A1Q93050 837 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 ATG4CQ96DT6 458 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 VCPIP1Q96JH7 1222 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 TACO1Q9BSH4 297 aaKnown RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 CXorf56Q9H5V9 222 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 ATP6V0A4Q9HBG4 840 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 KLHL11Q9NVR0 708 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 CNTN6Q9UQ52 1028 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.2■□□□□ 0.18
CNN3-207ENST00000545882 PCDHB4Q9Y5E5 795 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 ACTL7BQ9Y614 415 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 PHIPQ8WWQ0 1821 aa16.2■□□□□ 0.18
CNN3-207ENST00000545882 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 ZBED4O75132 1171 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ABHD2P08910 425 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 KRT10P13645 584 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ALADP13716 330 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 GNA15P30679 374 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 GJC1P36383 396 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 LIG4P49917 911 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ALDH5A1P51649 535 aaPredicted RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 ZNF280AP59817 542 aaPredicted RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 PRKCEQ02156 737 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 MTMR2Q13614 643 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 XRRA1Q6P2D8 792 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 TLDC1Q6P9B6 456 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 TRIM72Q6ZMU5 477 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ZCCHC9Q8N567 271 aaKnown RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 RBM15Q96T37 977 aaKnown RBP eCLIP16.19■□□□□ 0.18
CNN3-207ENST00000545882 KIAA1586Q9HCI6 787 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 NUB1Q9Y5A7 615 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 LOC102724159A0A0B4J2E5 919 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 PI4K2BG5E9Z4 385 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 IGF2BP3O00425 579 aaKnown RBP eCLIP16.19■□□□□ 0.18
CNN3-207ENST00000545882 LIASO43766 372 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 EGFRP00533 1210 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 EDN1P05305 212 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 PSAPP07602 524 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ETS1P14921 441 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 RPL7AP62424 266 aaKnown RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 ZNF252P-AS1Q0IIN9 211 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 PWP2Q15269 919 aaKnown RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 MTFR1Q15390 333 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ACCSLQ4AC99 568 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ABHD15Q6UXT9 468 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 ASRGL1Q7L266 308 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 RBBP8NLQ8NC74 664 aaPredicted RBP16.19■□□□□ 0.18
CNN3-207ENST00000545882 FEZF2Q8TBJ5 459 aa16.19■□□□□ 0.18
CNN3-207ENST00000545882 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms