RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MIS18BP1Q6P0N0 1132 aa16.77■□□□□ 0.27
LDLR-204ENST00000545707 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.27
LDLR-204ENST00000545707 SYDE1Q6ZW31 735 aaPredicted RBP16.77■□□□□ 0.27
LDLR-204ENST00000545707 LPAR1Q92633 364 aa16.77■□□□□ 0.27
LDLR-204ENST00000545707 IFT74Q96LB3 600 aa16.77■□□□□ 0.27
LDLR-204ENST00000545707 FAM81BQ96LP2 452 aa16.77■□□□□ 0.27
LDLR-204ENST00000545707 KIF9Q9HAQ2 790 aa16.77■□□□□ 0.27
LDLR-204ENST00000545707 MCM8Q9UJA3 840 aa16.77■□□□□ 0.27
LDLR-204ENST00000545707 AGO2Q9UKV8 859 aaKnown RBP16.77■□□□□ 0.27
LDLR-204ENST00000545707 RASA4BC9J798 803 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 RASA4O43374 803 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 RPSAP08865 295 aaKnown RBP16.76■□□□□ 0.27
LDLR-204ENST00000545707 MYBL1P10243 752 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 ATP5DP30049 168 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 MAN1A1P33908 653 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 MAGEA4P43358 317 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 PSMC4P43686 418 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 CUL2Q13617 745 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 FKBP1CQ5VVH2 108 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 ABRAQ8N0Z2 381 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 OR5B17Q8NGF7 314 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
LDLR-204ENST00000545707 SPOCK2Q92563 424 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 FAM212AQ96EL1 285 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 CXorf56Q9H5V9 222 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 ARHGAP28Q9P2N2 729 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 STK38LQ9Y2H1 464 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 POC1B-GALNT4F8VUJ3 575 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 DGAT1O75907 488 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 EDN1P05305 212 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 NQO1P15559 274 aaKnown RBP16.76■□□□□ 0.27
LDLR-204ENST00000545707 KLRC2P26717 231 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 CCND2P30279 289 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 ALDH5A1P51649 535 aaPredicted RBP16.76■□□□□ 0.27
LDLR-204ENST00000545707 CXCL9Q07325 125 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 GALNTL6Q49A17 601 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 TXNRD3NBQ6F5E7 133 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 CCDC89Q8N998 374 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.76■□□□□ 0.27
LDLR-204ENST00000545707 ATP6V0A1Q93050 837 aa16.76■□□□□ 0.27
LDLR-204ENST00000545707 GEMIN8Q9NWZ8 242 aaKnown RBP16.76■□□□□ 0.27
LDLR-204ENST00000545707 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.27
LDLR-204ENST00000545707 CDH16O75309 829 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 PIAS1O75925 651 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 WDR4P57081 412 aaKnown RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 CAV1Q03135 178 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 PSMD6Q15008 389 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 ZNF394Q53GI3 561 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 MFSD7Q6UXD7 560 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 ZNF677Q86XU0 584 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 RBBP8NLQ8NC74 664 aaPredicted RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 STAMBPL1Q96FJ0 436 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 TARS2Q9BW92 718 aaKnown RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 NKIRAS1Q9NYS0 192 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 ZNF148Q9UQR1 794 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 LRRIQ4A6NIV6 560 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 BANF1O75531 89 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 KRT16P08779 473 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 BPIFB4P59827 614 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 ACTR2P61160 394 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 PTP4A2Q12974 167 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 NFX1Q12986 1120 aaKnown RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 NEDD9Q14511 834 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 KATNAL2Q8IYT4 538 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 GIMAP7Q8NHV1 300 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 TRIM11Q96F44 468 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 C10orf88Q9H8K7 445 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 RBAKQ9NYW8 714 aaPredicted RBP16.75■□□□□ 0.27
LDLR-204ENST00000545707 ARL2BPQ9Y2Y0 163 aa16.75■□□□□ 0.27
LDLR-204ENST00000545707 F8VP50 259 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 PSTPIP1O43586 416 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 PSAPP07602 524 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 EZRP15311 586 aaKnown RBP16.74■□□□□ 0.27
LDLR-204ENST00000545707 TAC1P20366 129 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 GCAP28676 217 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 COPS2P61201 443 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 BNIP1Q12981 228 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 MTM1Q13496 603 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 PLEKHA7Q6IQ23 1121 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 KIRREL3Q8IZU9 778 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 ANKLE1Q8NAG6 615 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 ASAP3Q8TDY4 903 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 N4BP2L2Q92802 583 aaPredicted RBP16.74■□□□□ 0.27
LDLR-204ENST00000545707 KLHL29Q96CT2 875 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 PRKAG3Q9UGI9 489 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
LDLR-204ENST00000545707 EXOC1LA0A1B0GW35 172 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms