RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 LARP6Q9BRS8 491 aaKnown RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 MKNK1Q9BUB5 465 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 EDEM2Q9BV94 578 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 ADAM33Q9BZ11 813 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 VPS45Q9NRW7 570 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 PCDHGA5Q9Y5G8 931 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 PDCD11Q14690 1871 aaKnown RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 GCN1Q92616 2671 aaKnown RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 H7C4K7 107 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 SYN3O14994 580 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 CCDC192P0DO97 292 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 HSPA4P34932 840 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 DCAF4L1Q3SXM0 396 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 PLK5Q496M5 336 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 CTXN3Q4LDR2 81 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 BMP2KLQ5H9B9 411 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 NT5DC1Q5TFE4 455 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 LRSAM1Q6UWE0 723 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 RNF19BQ6ZMZ0 732 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 SLFN12Q8IYM2 578 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 FAM177A1Q8N128 213 aaPredicted RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 SYNPOQ8N3V7 929 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 LEMD2Q8NC56 503 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 FAM200AQ8TCP9 573 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 ZC3H10Q96K80 434 aaKnown RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 KIFC3Q9BVG8 833 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 DUSP15Q9H1R2 295 aaPredicted RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 CRISPLD1Q9H336 500 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 POLD4Q9HCU8 107 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 AFF4Q9UHB7 1163 aaKnown RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 LHX6Q9UPM6 363 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 YIPF1Q9Y548 306 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 FLNBO75369 2602 aaKnown RBP10.32□□□□□ -0.76
CHD4-212ENST00000545083 TRIP11Q15643 1979 aa10.32□□□□□ -0.76
CHD4-212ENST00000545083 CCDC163A0A0D9SF12 145 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 TMEM8BA6NDV4 472 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 WNT7AO00755 349 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 CPLX1O14810 134 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 DCLK1O15075 740 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 MEFVO15553 781 aaPredicted RBP10.31□□□□□ -0.76
CHD4-212ENST00000545083 BAG4O95429 457 aaKnown RBP10.31□□□□□ -0.76
CHD4-212ENST00000545083 SPATA31C1P0DKV0 1188 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 STK3Q13188 491 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 XKR4Q5GH76 650 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 SH3PXD2AQ5TCZ1 1133 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 ALKAL1Q6UXT8 129 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 TMEM130Q8N3G9 435 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 MCPH1Q8NEM0 835 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 CHFRQ96EP1 664 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 SUSD3Q96L08 255 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 SCNM1Q9BWG6 230 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 GPR88Q9GZN0 384 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 C2orf40Q9H1Z8 148 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 PCDHA12Q9UN75 941 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 CACNA1EQ15878 2313 aa10.31□□□□□ -0.76
CHD4-212ENST00000545083 EML5Q05BV3 1969 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 LNP1A1A4G5 178 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 AKAP3O75969 853 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 PRAMEF12O95522 483 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 OR4Q2P0C623 313 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 XRCC6P12956 609 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHD4-212ENST00000545083 NAMPTP43490 491 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 OSTNP61366 133 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 NR5A1Q13285 461 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 ATF7IP2Q5U623 682 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 FSTL4Q6MZW2 842 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 ZNF280DQ6N043 979 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 GAREM2Q75VX8 874 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 BEST2Q8NFU1 509 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 DEPTORQ8TB45 409 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 ZCCHC14Q8WYQ9 949 aaKnown RBP10.3□□□□□ -0.76
CHD4-212ENST00000545083 C18orf25Q96B23 403 aaPredicted RBP10.3□□□□□ -0.76
CHD4-212ENST00000545083 PGLYRP2Q96PD5 576 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 HHIPQ96QV1 700 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 TMEM209Q96SK2 561 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 NAP1L4Q99733 375 aaKnown RBP10.3□□□□□ -0.76
CHD4-212ENST00000545083 CDT1Q9H211 546 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 TTC12Q9H892 705 aaPredicted RBP10.3□□□□□ -0.76
CHD4-212ENST00000545083 SLC8A2Q9UPR5 921 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
CHD4-212ENST00000545083 FREM2Q5SZK8 3169 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 ATG2BQ96BY7 2078 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 BCLAF3A2AJT9 711 aaKnown RBP10.29□□□□□ -0.76
CHD4-212ENST00000545083 OTOL1A6NHN0 477 aaPredicted RBP10.29□□□□□ -0.76
CHD4-212ENST00000545083 CDC45O75419 566 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 MED24O75448 989 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 CAVIN2O95810 425 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 CPB1P15086 417 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 GRM5P41594 1212 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 TXKP42681 527 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 IRX6P78412 446 aaPredicted RBP10.29□□□□□ -0.76
CHD4-212ENST00000545083 CREB5Q02930 508 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 CALCRLQ16602 461 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 TMEM196Q5HYL7 178 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 CATSPER3Q86XQ3 398 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms