RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 SLC26A2P50443 739 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 SLC18A1P54219 525 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 GSCP56915 257 aaPredicted RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 IFT88Q13099 833 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 NCOA4Q13772 614 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 IER5Q5VY09 327 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 RIOX2Q8IUF8 465 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 PROCA1Q8NCQ7 364 aaPredicted RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 BTBD6Q96KE9 485 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 MRPL4Q9BYD3 311 aaKnown RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 DDX56Q9NY93 547 aaKnown RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 SAMD15Q9P1V8 674 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 BCS1LQ9Y276 419 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 DRG1Q9Y295 367 aaKnown RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 PTPN22Q9Y2R2 807 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 PCDHB4Q9Y5E5 795 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 LRRIQ4A6NIV6 560 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 TJP3O95049 919 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 ATP4AP20648 1035 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 FGFR4P22455 802 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
PAAF1-215ENST00000544909 TMEM270Q6UE05 265 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 ASAP3Q8TDY4 903 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 FNIP1Q8TF40 1166 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 PI4K2AQ9BTU6 479 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 AZI2Q9H6S1 392 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 UBN1Q9NPG3 1134 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 SENP1Q9P0U3 644 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 CEP83Q9Y592 693 aa13.23□□□□□ -0.29
PAAF1-215ENST00000544909 FAM189A1O60320 539 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 FARP2O94887 1054 aaPredicted RBP13.22□□□□□ -0.29
PAAF1-215ENST00000544909 KCNJ1P48048 391 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 ALDH5A1P51649 535 aaPredicted RBP13.22□□□□□ -0.29
PAAF1-215ENST00000544909 DGKZQ13574 1117 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 SGSM1Q2NKQ1 1148 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
PAAF1-215ENST00000544909 TDRPQ86YL5 185 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 ZCCHC9Q8N567 271 aaKnown RBP13.22□□□□□ -0.29
PAAF1-215ENST00000544909 TMEM35BQ8NCS4 154 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 CPA5Q8WXQ8 436 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 CCT6BQ92526 530 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 CCDC113Q9H0I3 377 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 APOBEC3GQ9HC16 384 aaKnown RBP13.22□□□□□ -0.29
PAAF1-215ENST00000544909 CHST7Q9NS84 486 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 FETUBQ9UGM5 382 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 ANAPC5Q9UJX4 755 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 CAPN7Q9Y6W3 813 aa13.22□□□□□ -0.29
PAAF1-215ENST00000544909 WDR90Q96KV7 1748 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 TCRBV5S1A1TA0A578 114 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 TMEM191CA6NGB0 347 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 O00370 1275 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 OGTO15294 1046 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 DNAJC8O75937 253 aaPredicted RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 WEE2P0C1S8 567 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 RALAP11233 206 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 UBA1P22314 1058 aaKnown RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 KLRC2P26717 231 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 ITGA8P53708 1063 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 SOX10P56693 466 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 NFX1Q12986 1120 aaKnown RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 CNGA2Q16280 664 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 SKIDA1Q1XH10 827 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 ANKRD20A8PQ5CZ79 823 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 ICE2Q659A1 982 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 PPP1R21Q6ZMI0 780 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 C1orf54Q8WWF1 131 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 ZNF606Q8WXB4 792 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 NKD2Q969F2 451 aaPredicted RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 C11orf70Q9BRQ4 267 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 TACO1Q9BSH4 297 aaKnown RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 RABEP2Q9H5N1 569 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 CHORDC1Q9UHD1 332 aaPredicted RBP13.21□□□□□ -0.29
PAAF1-215ENST00000544909 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
PAAF1-215ENST00000544909 DOCK5Q9H7D0 1870 aa13.21□□□□□ -0.3
PAAF1-215ENST00000544909 IGKV6-21A0A0C4DH24 114 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 TLDC2A0PJX2 215 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 MSCO60682 206 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 RASSF9O75901 435 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ADCY8P40145 1251 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ACOT2P49753 483 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 STAT5BP51692 787 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 SP2Q02086 613 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 XRCC4Q13426 336 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 CAPSQ13938 189 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 MORF4L2Q15014 288 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 DUOXA2Q1HG44 320 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms