RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	KIFC3	Q9BVG8	833 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	RNF208	Q9H0X6	261 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TSPYL2	Q9H2G4	693 aa	Predicted RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NDST4	Q9H3R1	872 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	KIAA1586	Q9HCI6	787 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	DMGDH	Q9UI17	866 aa	Known RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CAPN6	Q9Y6Q1	641 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	P4HA2	O15460	535 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CALU	O43852	315 aa	Predicted RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PRPF6	O94906	941 aa	Known RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PAPLN	O95428	1278 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NPTXR	O95502	500 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	FGFR1OP	O95684	399 aa	Known RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	KRT14	P02533	472 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	VTN	P04004	478 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	IFFO1	Q0D2I5	559 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	DCAF4L1	Q3SXM0	396 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CFAP221	Q4G0U5	840 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ZNF618	Q5T7W0	954 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SLFN12L	Q6IEE8	588 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	EMB	Q6PCB8	327 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CCDC170	Q8IYT3	715 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CCDC155	Q8N6L0	562 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ZSWIM2	Q8NEG5	633 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	DNAJB3	Q8WWF6	145 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	APBB2	Q92870	758 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ARL8A	Q96BM9	186 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	MRPL4	Q9BYD3	311 aa	Known RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PRO3102	Q9H379	93 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PLEKHA5	Q9HAU0	1116 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	EPB41L5	Q9HCM4	733 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SIX2	Q9NPC8	291 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	STARD7	Q9NQZ5	370 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	STIM2	Q9P246	746 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	EXOC7	Q9UPT5	735 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CNTN6	Q9UQ52	1028 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NOC2L	Q9Y3T9	749 aa	Known RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CDY2A	Q9Y6F7	541 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ANO9	A1A5B4	782 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TRIM43B	A6NCK2	446 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	LRRC53	A6NM62	1247 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	MGEA5	O60502	916 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NEBL	O76041	1014 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PRKCB	P05771	671 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NR1D1	P20393	614 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ITGB8	P26012	769 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SP4	Q02446	784 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	GFPT1	Q06210	699 aa	Predicted RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	RAPGEF1	Q13905	1077 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	VWA3B	Q502W6	1294 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	EPC2	Q52LR7	807 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NT5DC4	Q86YG4	428 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	BRSK2	Q8IWQ3	736 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SPATA4	Q8NEY3	305 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	HDAC7	Q8WUI4	952 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CDT1	Q9H211	546 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	HSPBP1	Q9NZL4	362 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NFU1	Q9UMS0	254 aa		7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.88	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PTPRJ	Q12913	1337 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	EPHB6	O15197	1021 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	B4GALT5	O43286	388 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CP	P00450	1065 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SELP	P16109	830 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CYP24A1	Q07973	514 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	KLHL7	Q8IXQ5	586 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	RNF149	Q8NC42	400 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ZNF689	Q96CS4	500 aa	Predicted RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SNX27	Q96L92	541 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CBWD1	Q9BRT8	395 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TRPV6	Q9H1D0	765 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	AGO3	Q9H9G7	860 aa	Known RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	CD248	Q9HCU0	757 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NENF	Q9UMX5	172 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ATP8B3	O60423	1300 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ESYT3	A0FGR9	886 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TISP43	B9A030	160 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341		C9IYK1	514 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	HEXIM1	O94992	359 aa	Known RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	GCNT3	O95395	438 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	FTCD	O95954	541 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TIMP1	P01033	207 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	C4BPA	P04003	597 aa	Known RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	RPSA	P08865	295 aa	Known RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SEC24C	P53992	1094 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PAPD7	Q5XG87	772 aa	Known RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	RHPN2	Q8IUC4	686 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	ZNF516	Q92618	1163 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	NOX5	Q96PH1	765 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	INO80B	Q9C086	356 aa	Predicted RBP	7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	GPR88	Q9GZN0	384 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	KLC4	Q9NSK0	619 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341	BAIAP2L1	Q9UHR4	511 aa		7.87	□□□□□ -1.15
GTF2H3-212	ENST00000543341		A0A1W2PQJ5	194 aa		7.86	□□□□□ -1.15
GTF2H3-212	ENST00000543341	TMCO5B	A8MYB1	307 aa		7.86	□□□□□ -1.15
GTF2H3-212	ENST00000543341	PFKM	P08237	780 aa		7.86	□□□□□ -1.15
GTF2H3-212	ENST00000543341	MYZAP	P0CAP1	466 aa		7.86	□□□□□ -1.15
GTF2H3-212	ENST00000543341	POLR2F	P61218	127 aa	Known RBP	7.86	□□□□□ -1.15
GTF2H3-212	ENST00000543341	SNCB	Q16143	134 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms