RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 ELAVL2Q12926 359 aaKnown RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 HSP90AA2PQ14568 343 aaPredicted RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 SF3A1Q15459 793 aaKnown RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 PTPRNQ16849 979 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 INF2Q27J81 1249 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 HLA-BQ31612 363 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 INAVAQ3KP66 663 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 MAP7D1Q3KQU3 841 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ALDH1L2Q3SY69 923 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ASPRV1Q53RT3 343 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 WDR45BQ5MNZ6 344 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 FHL5Q5TD97 284 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 TRIM68Q6AZZ1 485 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 SWSAP1Q6NVH7 229 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 CC2D1AQ6P1N0 951 aaPredicted RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 IL27RAQ6UWB1 636 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 KDM7AQ6ZMT4 941 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 USP53Q70EK8 1073 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 LEMD2Q8NC56 503 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 TTC16Q8NEE8 873 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 OLIG1Q8TAK6 271 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 SNRNP27Q8WVK2 155 aaKnown RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 EXTL1Q92935 676 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 CD101Q93033 1021 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZFRQ96KR1 1074 aaKnown RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZFP42Q96MM3 310 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 TTC14Q96N46 770 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 TBC1D32Q96NH3 1257 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZKSCAN3Q9BRR0 538 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 C1orf115Q9H7X2 142 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 KAT14Q9H8E8 782 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 DKK3Q9UBP4 350 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 TCEAL9Q9UHQ7 104 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 BTBD3Q9Y2F9 522 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 NOP58Q9Y2X3 529 aaKnown RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 PCDHGB2Q9Y5G2 931 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 INSL5Q9Y5Q6 135 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 MED13LQ71F56 2210 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 NBPF19A0A087WUL8 3843 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 HELZP42694 1942 aaKnown RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 TNRC6BQ9UPQ9 1833 aaKnown RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 A0A087WZ62 844 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 A0A1B0GTW7 788 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 TCRBV21S2A2A0A5A6 115 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ARHGEF37A1IGU5 675 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CASTOR2A6NHX0 329 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 BHMG1C9JSJ3 638 aaPredicted RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 ENC1O14682 589 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 MAFGO15525 162 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ORC4O43929 436 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 PPP1R11O60927 126 aaPredicted RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 MOSPD3O75425 235 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ITGB2P05107 769 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 PRKCBP05771 671 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CDK4P11802 303 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ITGB5P18084 799 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ITGB6P18564 788 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 USP11P51784 963 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CDC42EP1Q00587 391 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CYP4A11Q02928 519 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 DSC1Q08554 894 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 TWF1Q12792 350 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 LINC00303Q3SY05 128 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ARHGAP15Q53QZ3 475 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 STXBP5Q5T5C0 1151 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 GPR158Q5T848 1215 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 VPS53Q5VIR6 699 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 NAIF1Q69YI7 327 aaPredicted RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 MIS18BP1Q6P0N0 1132 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 USP17L6PQ6QN14 398 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 TMEM92Q6UXU6 159 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 SLC41A1Q8IVJ1 513 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 HACE1Q8IYU2 909 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 LSMEM2Q8N112 164 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ZCCHC9Q8N567 271 aaKnown RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 TXNDC5Q8NBS9 432 aaKnown RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 PNMA1Q8ND90 353 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CNNM3Q8NE01 707 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 SHKBP1Q8TBC3 707 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 USP33Q8TEY7 942 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CCDC97Q96F63 343 aaPredicted RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 VCPIP1Q96JH7 1222 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 TMEM87BQ96K49 555 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 PRIMPOLQ96LW4 560 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 FAM20AQ96MK3 541 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 LRRC3BQ96PB8 259 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 FDXACB1Q9BRP7 624 aaPredicted RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 TRIM6Q9C030 488 aaPredicted RBP3.66□□□□□ -1.82
CHD4-209ENST00000542717 SLC25A18Q9H1K4 315 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 ATXN3LQ9H3M9 355 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 THSD1Q9NS62 852 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 MIOSQ9NXC5 875 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CACNG4Q9UBN1 327 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 MMP17Q9ULZ9 603 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 CLCA2Q9UQC9 943 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 PLAAQ9Y263 795 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 PCDHGA1Q9Y5H4 931 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 WNT6Q9Y6F9 365 aa3.66□□□□□ -1.82
CHD4-209ENST00000542717 MED13Q9UHV7 2174 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms