RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 COMMD8Q9NX08 183 aa6.09□□□□□ -1.43
DDB1-219ENST00000541513 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
DDB1-219ENST00000541513 RAI14Q9P0K7 980 aa6.09□□□□□ -1.43
DDB1-219ENST00000541513 ADD3Q9UEY8 706 aaKnown RBP6.09□□□□□ -1.43
DDB1-219ENST00000541513 FBXL21Q9UKT6 434 aa6.09□□□□□ -1.43
DDB1-219ENST00000541513 PCOLCE2Q9UKZ9 415 aa6.09□□□□□ -1.43
DDB1-219ENST00000541513 RRP15Q9Y3B9 282 aaKnown RBP6.09□□□□□ -1.43
DDB1-219ENST00000541513 SPATA31A1Q5TZJ5 1347 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 CLCA1A8K7I4 914 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 J3QL48 77 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 FSCN2O14926 492 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 AURKAO14965 403 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 FTLP02792 175 aaPredicted RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 THBS1P07996 1170 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 CLTBP09497 229 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 CSF1P09603 554 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 SLFN14P0C7P3 912 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 ACADMP11310 421 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 LCP1P13796 627 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 RPS2P15880 293 aaKnown RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 PDE6AP16499 860 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 PTX3P26022 381 aaPredicted RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 TPP2P29144 1249 aaPredicted RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 EVCP57679 992 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 RBM6P78332 1123 aaKnown RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 POU4F1Q01851 419 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 TFCP2Q12800 502 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 DUSP4Q13115 394 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 SNAPC2Q13487 334 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 PPP2R5BQ15173 497 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 E2F5Q15329 346 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 EPHA7Q15375 998 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 TARBP2Q15633 366 aaKnown RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 SNX30Q5VWJ9 437 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 PRAMEF13Q5VWM6 474 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 NAA16Q6N069 864 aaPredicted RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 C11orf88Q6PI97 169 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 IL27RAQ6UWB1 636 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 CATSPERGQ6ZRH7 1159 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 KIAA1211Q6ZU35 1233 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 NLRP14Q86W24 1093 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 DNAJB8Q8NHS0 232 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 GOT1L1Q8NHS2 421 aaPredicted RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 RUFY2Q8WXA3 655 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 SDCCAG3Q96C92 435 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 MTFMTQ96DP5 389 aaKnown RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 FEM1CQ96JP0 617 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 LACRTQ9GZZ8 138 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 VPS33BQ9H267 617 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 EPS8L2Q9H6S3 715 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 NECTIN3Q9NQS3 549 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 KCND1Q9NSA2 647 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 HPF1Q9NWY4 346 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 RASAL2Q9UJF2 1139 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 ARHGAP26Q9UNA1 814 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 EDARQ9UNE0 448 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 COG5Q9UP83 839 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 PCDHGB5Q9Y5G0 923 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 VIRMAQ69YN4 1812 aaKnown RBP6.08□□□□□ -1.44
DDB1-219ENST00000541513 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 SHANK3Q9BYB0 1731 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 DISP2A7MBM2 1401 aa6.08□□□□□ -1.44
DDB1-219ENST00000541513 A0A1W2PPL8 197 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 hCG_1807616A0A1W2PRN6 198 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 AQP12BA6NM10 295 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 UBE2CO00762 179 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 SLC22A3O75751 556 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 SLC4A1P02730 911 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 QDPRP09417 244 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 AOAHP28039 575 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 ARL4DP49703 201 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 SEPHS1P49903 392 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 SEC24CP53992 1094 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 POLE2P56282 527 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 MAP2K1Q02750 393 aaPredicted RBP6.07□□□□□ -1.44
DDB1-219ENST00000541513 GPR19Q15760 415 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 ZNF827Q17R98 1081 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 DPY19L1Q2PZI1 675 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 MMEL1Q495T6 779 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 FLYWCH1Q4VC44 716 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 PITRM1Q5JRX3 1037 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 FAM182BQ5T319 152 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 SLC9C2Q5TAH2 1124 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 TAF3Q5VWG9 929 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 GPR139Q6DWJ6 353 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 SULT6B1Q6IMI4 303 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 GALNT17Q6IS24 598 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 BORAQ6PGQ7 559 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 TOM1L2Q6ZVM7 507 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 BTN2A1Q7KYR7 527 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 OXR1Q8N573 874 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 RNF214Q8ND24 703 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 RCBTB1Q8NDN9 531 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 TSPEARQ8WU66 669 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 STON2Q8WXE9 905 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 DLG3Q92796 817 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 NEIL1Q96FI4 390 aaPredicted RBP6.07□□□□□ -1.44
DDB1-219ENST00000541513 SUCLG2Q96I99 432 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms