RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TNK2Q07912 1038 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 FCHO2Q0JRZ9 810 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 SCRN1Q12765 414 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 CCINQ13939 588 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 DCAF4L1Q3SXM0 396 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 ATF7IP2Q5U623 682 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 TPGS2Q68CL5 300 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
COPA-205ENST00000541366 DEPTORQ8TB45 409 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
COPA-205ENST00000541366 LSM14BQ9BX40 385 aaKnown RBP12.95□□□□□ -0.34
COPA-205ENST00000541366 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 C8orf33Q9H7E9 229 aaPredicted RBP12.95□□□□□ -0.34
COPA-205ENST00000541366 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
COPA-205ENST00000541366 H7C4K7 107 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 SYN3O14994 580 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 MEFVO15553 781 aaPredicted RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
COPA-205ENST00000541366 CPB1P15086 417 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 DGKKQ5KSL6 1271 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 CPLX2Q6PUV4 134 aaKnown RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 ALKAL1Q6UXT8 129 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 CACNA2D4Q7Z3S7 1137 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 TMC8Q8IU68 726 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 ARID3BQ8IVW6 561 aaPredicted RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 GAB3Q8WWW8 586 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 TNFRSF25Q93038 417 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 PGLYRP2Q96PD5 576 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 MKNK1Q9BUB5 465 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 YIPF1Q9Y548 306 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 NUB1Q9Y5A7 615 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 DMXL2Q8TDJ6 3036 aa12.94□□□□□ -0.34
COPA-205ENST00000541366 DSPP15924 2871 aaKnown RBP12.94□□□□□ -0.34
COPA-205ENST00000541366 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 HOXA6P31267 233 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 MPLP40238 635 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 NAMPTP43490 491 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 FOXC1Q12948 553 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 XKR4Q5GH76 650 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 RNF43Q68DV7 783 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 ZNF280DQ6N043 979 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 RALGPS2Q86X27 583 aaPredicted RBP12.93□□□□□ -0.34
COPA-205ENST00000541366 FAM200AQ8TCP9 573 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 LOXL4Q96JB6 756 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 CDT1Q9H211 546 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 TIMM13Q9Y5L4 95 aaPredicted RBP12.93□□□□□ -0.34
COPA-205ENST00000541366 CYP46A1Q9Y6A2 500 aa12.93□□□□□ -0.34
COPA-205ENST00000541366 LAMA5O15230 3695 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 C4orf47A7E2U8 309 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 NEMFO60524 1076 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 SOAT2O75908 522 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 PRAMEF12O95522 483 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 CYP11B2P19099 503 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 MCM4P33991 863 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 GRM5P41594 1212 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 NOVA1P51513 510 aaKnown RBP12.92□□□□□ -0.34
COPA-205ENST00000541366 CDR1P51861 262 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 ZNF568Q3ZCX4 644 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 GAREM2Q75VX8 874 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 LEMD2Q8NC56 503 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 DDX12PQ92771 950 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 MSANTD3Q96H12 275 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 SUSD3Q96L08 255 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
COPA-205ENST00000541366 WASF3Q9UPY6 502 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 TNFSF13BQ9Y275 285 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 ABCA7Q8IZY2 2146 aa12.92□□□□□ -0.34
COPA-205ENST00000541366 CITO14578 2027 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 STK36Q9NRP7 1315 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 DPYSL4O14531 572 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 DCLK1O15075 740 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 XBP1P17861 261 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 KRT2P35908 639 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 FOSBP53539 338 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
COPA-205ENST00000541366 ZNF252P-AS1Q0IIN9 211 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 DUSP4Q13115 394 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 ACAP1Q15027 740 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 PLK5Q496M5 336 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 SEZ6Q53EL9 994 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 C1orf228Q6PIY5 440 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 TTC9BQ8N6N2 239 aa12.91□□□□□ -0.34
COPA-205ENST00000541366 KDF1Q8NAX2 398 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms