RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 VIPR2P41587 438 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 PPP2R3AQ06190 1150 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 TSSK4Q6SA08 328 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 USP37Q86T82 979 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 SUMF1Q8NBK3 374 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 ATRIPQ8WXE1 791 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 SMARCD2Q92925 531 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 TMX3Q96JJ7 454 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 MAFFQ9ULX9 164 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 YIPF1Q9Y548 306 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 MYH11P35749 1972 aa26.11■■□□□ 1.77
LEMD3-203ENST00000541171 SHISA7A6NL88 538 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 GDI1P31150 447 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 TEAD2Q15562 447 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 ARL6IP4Q66PJ3 421 aaKnown RBP26.1■■□□□ 1.77
LEMD3-203ENST00000541171 VITQ6UXI7 678 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 GPBP1Q86WP2 473 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 MYCT1Q8N699 235 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 IRF7Q92985 503 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 FAM212AQ96EL1 285 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 REEP2Q9BRK0 252 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 SLITRK6Q9H5Y7 841 aa26.1■■□□□ 1.77
LEMD3-203ENST00000541171 FANCMQ8IYD8 2048 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 K7ENM7 598 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 HNRNPDLO14979 420 aaKnown RBP26.09■■□□□ 1.77
LEMD3-203ENST00000541171 OAZ2O95190 189 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 PSMC3P17980 439 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 RPS9P46781 194 aaKnown RBP26.09■■□□□ 1.77
LEMD3-203ENST00000541171 FZD5Q13467 585 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 ZBTB6Q15916 424 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 LEMD2Q8NC56 503 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 ZSCAN18Q8TBC5 510 aaPredicted RBP26.09■■□□□ 1.77
LEMD3-203ENST00000541171 CALML4Q96GE6 196 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 ZHX3Q9H4I2 956 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 RPF1Q9H9Y2 349 aaKnown RBP26.09■■□□□ 1.77
LEMD3-203ENST00000541171 TBX20Q9UMR3 447 aa26.09■■□□□ 1.77
LEMD3-203ENST00000541171 OTOGLQ3ZCN5 2332 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 MAN2B1O00754 1011 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 XPOTO43592 962 aaKnown RBP26.08■■□□□ 1.77
LEMD3-203ENST00000541171 FAM13AO94988 1023 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 CYP3A5P20815 502 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 UBA7P41226 1012 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 DUSP4Q13115 394 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 ENOX2Q16206 610 aaKnown RBP26.08■■□□□ 1.77
LEMD3-203ENST00000541171 ZNF334Q9HCZ1 680 aaPredicted RBP26.08■■□□□ 1.77
LEMD3-203ENST00000541171 NCDNQ9UBB6 729 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 ODF2LQ9ULJ1 636 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 PCDHGA2Q9Y5H1 932 aa26.08■■□□□ 1.77
LEMD3-203ENST00000541171 PDCD11Q14690 1871 aaKnown RBP26.08■■□□□ 1.77
LEMD3-203ENST00000541171 PPEF2O14830 753 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 SPTLC1O15269 473 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 OGTO15294 1046 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 VNN2O95498 520 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 KRT18P05783 430 aaKnown RBP26.07■■□□□ 1.76
LEMD3-203ENST00000541171 EPHA5P54756 1037 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 MTAPQ13126 283 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 KYAT1Q16773 422 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 MAP4K3Q8IVH8 894 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 BEST2Q8NFU1 509 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 SHKBP1Q8TBC3 707 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 LRRC15Q8TF66 581 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 AK8Q96MA6 479 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 CRISPLD1Q9H336 500 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 ZSCAN32Q9NX65 697 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 SLC27A5Q9Y2P5 690 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 PATJQ8NI35 1801 aa26.07■■□□□ 1.76
LEMD3-203ENST00000541171 GPR179Q6PRD1 2367 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 A0A1W2PRU2 124 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 OR6C75A6NL08 312 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 ZNF263O14978 683 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 CD2BP2O95400 341 aaKnown RBP26.06■■□□□ 1.76
LEMD3-203ENST00000541171 AARSP49588 968 aaKnown RBP eCLIP26.06■■□□□ 1.76
LEMD3-203ENST00000541171 EPHB3P54753 998 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 MCM6Q14566 821 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 OVOS1Q6IE37 1185 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 GPIHBP1Q8IV16 184 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 RASSF8Q8NHQ8 419 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 DEPDC1BQ8WUY9 529 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 FAM3CQ92520 227 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 MSTO1Q9BUK6 570 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 OXCT2Q9BYC2 517 aaPredicted RBP26.06■■□□□ 1.76
LEMD3-203ENST00000541171 SMC3Q9UQE7 1217 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.06■■□□□ 1.76
LEMD3-203ENST00000541171 PIAS3Q9Y6X2 628 aa26.06■■□□□ 1.76
LEMD3-203ENST00000541171 DCHS1Q96JQ0 3298 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 HEPACAM2A8MVW5 462 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 TRAK2O60296 914 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 ALDH1A3P47895 512 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 GPR17Q13304 367 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 PLD1Q13393 1074 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 JADE1Q6IE81 842 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 DGLUCYQ7Z3D6 616 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 ZBTB44Q8NCP5 570 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 DNAJC25Q9H1X3 360 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 LMAN1LQ9HAT1 526 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 PARVGQ9HBI0 331 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 BLOC1S4Q9NUP1 217 aa26.05■■□□□ 1.76
LEMD3-203ENST00000541171 FAM189A1O60320 539 aa26.04■■□□□ 1.76
LEMD3-203ENST00000541171 PIGRP01833 764 aa26.04■■□□□ 1.76
LEMD3-203ENST00000541171 KARSQ15046 597 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms