RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 C4orf32Q8N8J7 132 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 IGSF22Q8N9C0 903 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 CSGALNACT1Q8TDX6 532 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 C8orf76Q96K31 380 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 NTPCRQ9BSD7 190 aaKnown RBP29.27■■■□□ 2.28
CHFR-218ENST00000540963 TIPINQ9BVW5 301 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 HEPACAM2A8MVW5 462 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 OAZ2O95190 189 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 CCNE1P24864 410 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 MARCKSP29966 332 aaPredicted RBP29.26■■■□□ 2.27
CHFR-218ENST00000540963 GUCY1B3Q02153 619 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 FCHO2Q0JRZ9 810 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 ERICH6BQ5W0A0 696 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 RNF19BQ6ZMZ0 732 aa29.26■■■□□ 2.27
CHFR-218ENST00000540963 M0QZQ0 153 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 HIP1RO75146 1068 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 TOM1L1O75674 476 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 NEK4P51957 841 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 SATB1Q01826 763 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 YWHAHQ04917 246 aaPredicted RBP29.25■■■□□ 2.27
CHFR-218ENST00000540963 SIM2Q14190 667 aaPredicted RBP29.25■■■□□ 2.27
CHFR-218ENST00000540963 TEAD2Q15562 447 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 CSRP2Q16527 193 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 PRR23BQ6ZRT6 265 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 YAF2Q8IY57 180 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 SHKBP1Q8TBC3 707 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 SNX29Q8TEQ0 813 aa29.25■■■□□ 2.27
CHFR-218ENST00000540963 NOL7Q9UMY1 257 aaKnown RBP29.25■■■□□ 2.27
CHFR-218ENST00000540963 MEFVO15553 781 aaPredicted RBP29.24■■■□□ 2.27
CHFR-218ENST00000540963 ST3GAL1Q11201 340 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 GAS6Q14393 721 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 LPAL2Q16609 132 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 SLC10A6Q3KNW5 377 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 DGKKQ5KSL6 1271 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 LLPHQ9BRT6 129 aaKnown RBP29.24■■■□□ 2.27
CHFR-218ENST00000540963 LRRC3Q9BY71 257 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 SLITRK6Q9H5Y7 841 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 PLEKHA5Q9HAU0 1116 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 SEMA4GQ9NTN9 838 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 YIPF1Q9Y548 306 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 DYNC1LI1Q9Y6G9 523 aaKnown RBP29.24■■■□□ 2.27
CHFR-218ENST00000540963 MYH11P35749 1972 aa29.24■■■□□ 2.27
CHFR-218ENST00000540963 NCANO14594 1321 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 KRT37O76014 449 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 GJA1P17302 382 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 HOXA6P31267 233 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 STRN3Q13033 797 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 MAPK7Q13164 816 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 NOLC1Q14978 699 aaKnown RBP eCLIP29.23■■■□□ 2.27
CHFR-218ENST00000540963 ZPBP2Q6X784 338 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 LONP2Q86WA8 852 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 FBXO18Q8NFZ0 1043 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 SPIRE2Q8WWL2 714 aa29.23■■■□□ 2.27
CHFR-218ENST00000540963 NUP210Q8TEM1 1887 aaPredicted RBP29.23■■■□□ 2.27
CHFR-218ENST00000540963 LRPAP1P30533 357 aa29.22■■■□□ 2.27
CHFR-218ENST00000540963 EPHB3P54753 998 aa29.22■■■□□ 2.27
CHFR-218ENST00000540963 RINT1Q6NUQ1 792 aa29.22■■■□□ 2.27
CHFR-218ENST00000540963 PRR23CQ6ZRP0 262 aa29.22■■■□□ 2.27
CHFR-218ENST00000540963 C1orf186Q6ZWK4 172 aa29.22■■■□□ 2.27
CHFR-218ENST00000540963 RALGPS2Q86X27 583 aaPredicted RBP29.22■■■□□ 2.27
CHFR-218ENST00000540963 ASB3Q9Y575 518 aa29.22■■■□□ 2.27
CHFR-218ENST00000540963 MYBPHLA2RUH7 354 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 OR6C75A6NL08 312 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 E9PMD0 336 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 HRO43593 1189 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 SEC24BO95487 1268 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 GUCY2CP25092 1073 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 AARSP49588 968 aaKnown RBP eCLIP29.21■■■□□ 2.27
CHFR-218ENST00000540963 KRT79Q5XKE5 535 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 TMC8Q8IU68 726 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 DDX1Q92499 740 aaKnown RBP29.21■■■□□ 2.27
CHFR-218ENST00000540963 OBP2AQ9NY56 170 aa29.21■■■□□ 2.27
CHFR-218ENST00000540963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP29.2■■■□□ 2.26
CHFR-218ENST00000540963 K7ESF4 209 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 LAD1O00515 517 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 SLC16A4O15374 487 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 EIF5BO60841 1220 aaKnown RBP29.2■■■□□ 2.26
CHFR-218ENST00000540963 FGF19O95750 216 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 CYP3A5P20815 502 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 KPNA1P52294 538 aaPredicted RBP29.2■■■□□ 2.26
CHFR-218ENST00000540963 MCL1Q07820 350 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 GPR17Q13304 367 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 PPM1JQ5JR12 505 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.2■■■□□ 2.26
CHFR-218ENST00000540963 SYNPOQ8N3V7 929 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 KCTD17Q8N5Z5 321 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 ZBTB45Q96K62 511 aaPredicted RBP29.2■■■□□ 2.26
CHFR-218ENST00000540963 TSPAN18Q96SJ8 248 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 RUSC1Q9BVN2 902 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 TUBGCP4Q9UGJ1 667 aa29.2■■■□□ 2.26
CHFR-218ENST00000540963 A0A1W2PRU2 124 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 CHURC1-FNTBB4DL54 471 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 VNN2O95498 520 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 HARSP12081 509 aaKnown RBP29.19■■■□□ 2.26
CHFR-218ENST00000540963 ALDH1A3P47895 512 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 FNTBP49356 437 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 SMTNP53814 917 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 GNL2Q13823 731 aaKnown RBP29.19■■■□□ 2.26
CHFR-218ENST00000540963 ARHGAP29Q52LW3 1261 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 RSPRY1Q96DX4 576 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms