RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SLC44A3Q8N4M1 653 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 C2orf15Q8WU43 125 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 C18orf25Q96B23 403 aaPredicted RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 BORCS6Q96GS4 357 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CCDC34Q96HJ3 373 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 KIAA1586Q9HCI6 787 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 SLC2A4RGQ9NR83 387 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CACNG4Q9UBN1 327 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 CPSF3Q9UKF6 684 aaKnown RBP11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ZNF318Q5VUA4 2279 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ZDBF2Q9HCK1 2354 aa11.26□□□□□ -0.61
CDCA3-208ENST00000540683 ANHXE9PGG2 379 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-208ENST00000540683 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-208ENST00000540683 MAGEA9P43362 315 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 BRCC3P46736 316 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
CDCA3-208ENST00000540683 AARSP49588 968 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDCA3-208ENST00000540683 EPHB3P54753 998 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 ARPP19P56211 112 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 SOX4Q06945 474 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-208ENST00000540683 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 C1orf228Q6PIY5 440 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 PDZD4Q76G19 769 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-208ENST00000540683 SFR1Q86XK3 245 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 SPATA18Q8TC71 538 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 FGF13Q92913 245 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 USP28Q96RU2 1077 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 ASAH2Q9NR71 780 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 PANK4Q9NVE7 773 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 CDH22Q9UJ99 828 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
CDCA3-208ENST00000540683 FRMD3A2A2Y4 597 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 I3L4J1 428 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 NCAM2O15394 837 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 TBC1D4O60343 1298 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 PRPF40AO75400 957 aaKnown RBP11.24□□□□□ -0.61
CDCA3-208ENST00000540683 ECI2O75521 394 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 RHOP08100 348 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
CDCA3-208ENST00000540683 ME1P48163 572 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 TAF6P49848 677 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 LILRA4P59901 499 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 NHLH1Q02575 133 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 PRKCQQ04759 706 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 GRIN1Q05586 938 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 GPR17Q13304 367 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 HTR4Q13639 388 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 VEPH1Q14D04 833 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 SPECC1Q5M775 1068 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 PHLDB3Q6NSJ2 640 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 HS2ST1Q7LGA3 356 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 CEP57L1Q8IYX8 460 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
CDCA3-208ENST00000540683 SIX5Q8N196 739 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 FLCNQ8NFG4 579 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 MYADMQ96S97 322 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 NELL2Q99435 816 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 TUBGCP4Q9UGJ1 667 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
CDCA3-208ENST00000540683 INSL5Q9Y5Q6 135 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 UBE4BO95155 1302 aa11.24□□□□□ -0.61
CDCA3-208ENST00000540683 WDR27A2RRH5 827 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 MYMKA6NI61 221 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 EIF3DO15371 548 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDCA3-208ENST00000540683 EXTL3O43909 919 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 FAM189A1O60320 539 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 PPP1R37O75864 691 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 CYP11A1P05108 521 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 MYL1P05976 194 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 AOC1P19801 751 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 TSPY1Q01534 308 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 ADCY1Q08828 1119 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 MYO1EQ12965 1108 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 TAF12Q16514 161 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 SEZ6Q53EL9 994 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 C9orf57Q5W0N0 161 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 CD300LGQ6UXG3 332 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 TMEM86AQ8N2M4 240 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 GOLGA5Q8TBA6 731 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 ATOH1Q92858 354 aaPredicted RBP11.23□□□□□ -0.61
CDCA3-208ENST00000540683 CCDC47Q96A33 483 aaKnown RBP11.23□□□□□ -0.61
CDCA3-208ENST00000540683 SENP8Q96LD8 212 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 RAPGEFL1Q9UHV5 662 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 ITGA11Q9UKX5 1188 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 NUMBLQ9Y6R0 609 aa11.23□□□□□ -0.61
CDCA3-208ENST00000540683 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms