RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZWILCHQ9H900 591 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 RIC8AQ9NPQ8 531 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 PKD2L1Q9P0L9 805 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 TMCO1Q9UM00 188 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 RPS6KL1Q9Y6S9 549 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 MYH15Q9Y2K3 1946 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 MYH10P35580 1976 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ENTPD5O75356 428 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 GNA14O95837 355 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 EPHB2P29323 1055 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ZNF211Q13398 564 aaPredicted RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 CNGA2Q16280 664 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ZNF697Q5TEC3 545 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 NLRX1Q86UT6 975 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 C7orf31Q8N865 590 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 RAB3IL1Q8TBN0 382 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 AGBL1Q96MI9 1066 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 C7orf25Q9BPX7 421 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 NEUROG2Q9H2A3 272 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 PRR12Q9ULL5 1215 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 PCDHA12Q9UN75 941 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 LRRC42Q9Y546 428 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 MROH7Q68CQ1 1323 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 SPOPO43791 374 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 KLRC4O43908 158 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ESRRAP11474 423 aaPredicted RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 EIF2AK2P19525 551 aaKnown RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 DHX34Q14147 1143 aaKnown RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 ZCWPW2Q504Y3 356 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 FITM2Q8N6M3 262 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 PLEKHG4BQ96PX9 1271 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 RMDN3Q96TC7 470 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 TUBB6Q9BUF5 446 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 SEMA6BQ9H3T3 888 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 DNAJC17Q9NVM6 304 aaKnown RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 TMEM260Q9NX78 707 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 GINS2Q9Y248 185 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ADGRA2Q96PE1 1338 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 MYMKA6NI61 221 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ZFXP17010 805 aaPredicted RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 TNFAIP3P21580 790 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 CPT1AP50416 773 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TRIM32Q13049 653 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TMEM132BQ14DG7 1078 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 GRAMD4Q6IC98 578 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 RFX8Q6ZV50 586 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 EPM2AIP1Q7L775 607 aaPredicted RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 GUF1Q8N442 669 aaKnown RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 ZNF384Q8TF68 577 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 SCFD2Q8WU76 684 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TLCD1Q96CP7 247 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TTC1Q99614 292 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TTYH3Q9C0H2 523 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 SEMA4AQ9H3S1 761 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 DNAJC18Q9H819 358 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 PREBQ9HCU5 417 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 EPHB6O15197 1021 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TPBGLP0DKB5 382 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 HNRNPH3P31942 346 aaKnown RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 STAT1P42224 750 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 SKIV2L2P42285 1042 aaKnown RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 VPS41P49754 854 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 GRM4Q14833 912 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TMED2Q15363 201 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 BTNL9Q6UXG8 535 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ARMCX2Q7L311 632 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 GPBP1Q86WP2 473 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 JAMLQ86YT9 394 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 NFS1Q9Y697 457 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 PVALEFA0A1B0GWK0 134 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 RASA4BC9J798 803 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 RASA4O43374 803 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 SUPT3HO75486 399 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ZWINTO95229 277 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ERFP50548 548 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TLE2Q04725 743 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 SPARCL1Q14515 664 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 RRP1BQ14684 758 aaKnown RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 NPY5RQ15761 445 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 SPOUT1Q5T280 376 aaKnown RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 RSPH3Q86UC2 560 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ABRAQ8N0Z2 381 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 TBC1D10AQ9BXI6 508 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 ROPN1BQ9BZX4 212 aaPredicted RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 ROPN1Q9HAT0 212 aaPredicted RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 NMRK1Q9NWW6 199 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 NKX1-2Q9UD57 310 aaPredicted RBP9.19□□□□□ -0.94
DDB1-217ENST00000540166 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
DDB1-217ENST00000540166 LTBP1Q14766 1721 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 CFAP69A5D8W1 941 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 HNRNPRO43390 633 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 CABYRO75952 493 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 ALADP13716 330 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms