RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 WDR4P57081 412 aaKnown RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 MGAT5Q09328 741 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 MAMLD1Q13495 774 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 PSMD6Q15008 389 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 ZKSCAN8Q15776 578 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 ZACNQ401N2 412 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 ABRAQ8N0Z2 381 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 CLEC4DQ8WXI8 215 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 THOC1Q96FV9 657 aaKnown RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 FRMD8P1Q9BZ68 369 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 GPRC5CQ9NQ84 441 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 GGT7Q9UJ14 662 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 PNMA3Q9UL41 463 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 SHOC2Q9UQ13 582 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 CNTN6Q9UQ52 1028 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 STK38LQ9Y2H1 464 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
UBE3B-209ENST00000539584 FAM170AA1A519 330 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SMAPO00193 183 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ALOX15BO15296 676 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 LIASO43766 372 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 EDF1O60869 148 aaKnown RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 LMNAP02545 664 aaKnown RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ASNSP08243 561 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 FOXN2P32314 431 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 TMED2Q15363 201 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 P3H1Q32P28 736 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 WASHC2DQ5SRD0 308 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 CENPUQ71F23 418 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 BZW1Q7L1Q6 419 aaKnown RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 APLFQ8IW19 511 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 LRRC8CQ8TDW0 803 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 CPA5Q8WXQ8 436 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 LPAR1Q92633 364 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 C9orf72Q96LT7 481 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 HERPUD2Q9BSE4 406 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SAR1AQ9NR31 198 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 COL20A1Q9P218 1284 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 RGPD3A6NKT7 1758 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 RGPD4Q7Z3J3 1758 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ABLIM1O14639 778 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 HNRNPDLO14979 420 aaKnown RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 DGAT1O75907 488 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ZWINTO95229 277 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 NOMO3P69849 1222 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 TAP1Q03518 808 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SF3A3Q12874 501 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ANKRD20A3Q5VUR7 823 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SLC39A4Q6P5W5 647 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SEPT12Q8IYM1 358 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 KIF2BQ8N4N8 673 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ALLCQ8N6M5 410 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 FEZF2Q8TBJ5 459 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SYTL5Q8TDW5 730 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 FBXO41Q8TF61 875 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 ALKBH8Q96BT7 664 aaKnown RBP14.03□□□□□ -0.16
UBE3B-209ENST00000539584 FNBP1Q96RU3 617 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 TRABDQ9H4I3 376 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 MLXIPLQ9NP71 852 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 PCDHA10Q9Y5I2 948 aa14.03□□□□□ -0.16
UBE3B-209ENST00000539584 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.16
UBE3B-209ENST00000539584 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.16
UBE3B-209ENST00000539584 LDHAP00338 332 aaKnown RBP14.02□□□□□ -0.16
UBE3B-209ENST00000539584 TSHRP16473 764 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 CALB2P22676 271 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 PHBP35232 272 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 SPP2Q13103 211 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 AGBL1Q96MI9 1066 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 HEMGNQ9BXL5 484 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 MYLK2Q9H1R3 596 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 RNPEPL1Q9HAU8 725 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 SAYSD1Q9NPB0 183 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.16
UBE3B-209ENST00000539584 PKD2L1Q9P0L9 805 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 PSMC3IPQ9P2W1 217 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-209ENST00000539584 EFR3BQ9Y2G0 817 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 LRRC42Q9Y546 428 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 STYXL1Q9Y6J8 313 aa14.02□□□□□ -0.16
UBE3B-209ENST00000539584 C4BPAP04003 597 aaKnown RBP14.02□□□□□ -0.17
UBE3B-209ENST00000539584 ITGAVP06756 1048 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 KRT15P19012 456 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 VPS41P49754 854 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 MAP3K10Q02779 954 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 CUL2Q13617 745 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 PGM5Q15124 567 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 UGCGQ16739 394 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 FYB2Q5VWT5 728 aa14.02□□□□□ -0.17
UBE3B-209ENST00000539584 MIS18BP1Q6P0N0 1132 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms