RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 SDCBP2Q9H190 292 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 DEF6Q9H4E7 631 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 VRTNQ9H8Y1 702 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 SLC38A7Q9NVC3 462 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 TMEM161AQ9NX61 479 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 TRMT1Q9NXH9 659 aaKnown RBP20.52■□□□□ 0.88
TRPT1-207ENST00000539436 PCDHB7Q9Y5E2 793 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 PCDHB4Q9Y5E5 795 aa20.52■□□□□ 0.88
TRPT1-207ENST00000539436 PRKCIP41743 596 aa20.51■□□□□ 0.87
TRPT1-207ENST00000539436 MYO1EQ12965 1108 aa20.51■□□□□ 0.87
TRPT1-207ENST00000539436 ACRBPQ8NEB7 543 aa20.51■□□□□ 0.87
TRPT1-207ENST00000539436 MMS19Q96T76 1030 aa20.51■□□□□ 0.87
TRPT1-207ENST00000539436 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
TRPT1-207ENST00000539436 CASTOR2A6NHX0 329 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 SPTLC1O15269 473 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 NDUFA10O95299 355 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 LRPAP1P30533 357 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 CNKSR3Q6P9H4 555 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 TMEM270Q6UE05 265 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 GLB1LQ6UWU2 654 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 SLC47A2Q86VL8 602 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 LRRC52Q8N7C0 313 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 PAAF1Q9BRP4 392 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 CISHQ9NSE2 258 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 LRFN2Q9ULH4 789 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 SNX9Q9Y5X1 595 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 TET1Q8NFU7 2136 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 SSU72P8A0A1W2PR75 194 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 USP27XA6NNY8 438 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 AKR1B10O60218 316 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 STAU1O95793 577 aaKnown RBP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 RFC2P35250 354 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 CYLC1P35663 651 aaPredicted RBP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 GATMP50440 423 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 CLCNKBP51801 687 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 KIF11P52732 1056 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 TNNC1P63316 161 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 IKBKEQ14164 716 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 ASTE1Q2TB18 679 aaPredicted RBP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 MFSD5Q6N075 450 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 CCDC170Q8IYT3 715 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 UBR7Q8N806 425 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 SLC20A1Q8WUM9 679 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 JAKMIP2Q96AA8 810 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 BCO2Q9BYV7 579 aa20.5■□□□□ 0.87
TRPT1-207ENST00000539436 ELAC1Q9H777 363 aaKnown RBP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 BZW2Q9Y6E2 419 aaKnown RBP20.5■□□□□ 0.87
TRPT1-207ENST00000539436 CCDC172P0C7W6 258 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 ACRP10323 421 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 CYP27A1Q02318 531 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 GFPT1Q06210 699 aaPredicted RBP20.49■□□□□ 0.87
TRPT1-207ENST00000539436 GRIK3Q13003 919 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 ZNF394Q53GI3 561 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 NOMO2Q5JPE7 1267 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 ADAMTS1Q9UHI8 967 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 ADGRG1Q9Y653 693 aa20.49■□□□□ 0.87
TRPT1-207ENST00000539436 PDCD11Q14690 1871 aaKnown RBP20.49■□□□□ 0.87
TRPT1-207ENST00000539436 A0A0U1RQJ8 604 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 FAM170AA1A519 330 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 ZNF263O14978 683 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 P4HA1P13674 534 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 KCNJ6P48051 423 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 TAF3Q5VWG9 929 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 NOP9Q86U38 636 aaKnown RBP20.48■□□□□ 0.87
TRPT1-207ENST00000539436 ZNF280BQ86YH2 543 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 FMNL3Q8IVF7 1028 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 TMEM199Q8N511 208 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 RBBP8NLQ8NC74 664 aaPredicted RBP20.48■□□□□ 0.87
TRPT1-207ENST00000539436 ATRIPQ8WXE1 791 aa20.48■□□□□ 0.87
TRPT1-207ENST00000539436 REXO2Q9Y3B8 237 aaKnown RBP20.48■□□□□ 0.87
TRPT1-207ENST00000539436 MKI67P46013 3256 aaKnown RBP20.48■□□□□ 0.87
TRPT1-207ENST00000539436 A0A087X0T9 212 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 KPNA7A9QM74 516 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 PODXLO00592 558 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 INPPL1O15357 1258 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 UPP2O95045 317 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 FAM228BP0C875 321 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 CYP11B1P15538 503 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 TAF6P49848 677 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 ZNF560Q96MR9 790 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 PPP2R2CQ9Y2T4 447 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 EIF3CLB5ME19 914 aaKnown RBP20.47■□□□□ 0.87
TRPT1-207ENST00000539436 B4GALT3O60512 393 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 DDHD2O94830 711 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 LILRA4P59901 499 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 ORC1Q13415 861 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 TUSC3Q13454 348 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 GLYCTKQ8IVS8 523 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 C7orf61Q8IZ16 206 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 CCAR2Q8N163 923 aaKnown RBP20.47■□□□□ 0.87
TRPT1-207ENST00000539436 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 C3orf58Q8NDZ4 430 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 OLIG1Q8TAK6 271 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 URGCPQ8TCY9 931 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 EPS8L1Q8TE68 723 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 EIF3CQ99613 913 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms