RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 KIAA0754O94854 1291 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 ACSL3O95573 720 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 RPL7AP62424 266 aaKnown RBP26.46■■□□□ 1.83
RAB40C-204ENST00000538492 ZPBP2Q6X784 338 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 ANKS1BQ7Z6G8 1248 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 MAIP1Q8WWC4 291 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 MRPL4Q9BYD3 311 aaKnown RBP26.46■■□□□ 1.83
RAB40C-204ENST00000538492 CNOT10Q9H9A5 744 aaKnown RBP26.46■■□□□ 1.83
RAB40C-204ENST00000538492 IRF6O14896 467 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 TOM1L1O75674 476 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 PAEPP09466 180 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 IRX3P78415 501 aaPredicted RBP26.46■■□□□ 1.83
RAB40C-204ENST00000538492 ADCY2Q08462 1091 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 LAMTOR4Q0VGL1 99 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 OTUD5Q96G74 571 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 SNF8Q96H20 258 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 VCPIP1Q96JH7 1222 aa26.46■■□□□ 1.83
RAB40C-204ENST00000538492 ADM5C9JUS6 153 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 MEFVO15553 781 aaPredicted RBP26.45■■□□□ 1.82
RAB40C-204ENST00000538492 PSTPIP1O43586 416 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 ASS1P00966 412 aaKnown RBP26.45■■□□□ 1.82
RAB40C-204ENST00000538492 IVDP26440 423 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 KLF1Q13351 362 aaPredicted RBP26.45■■□□□ 1.82
RAB40C-204ENST00000538492 C6orf118Q5T5N4 469 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 CHADLQ6NUI6 762 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 SCINQ9Y6U3 715 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 RASGRF2O14827 1237 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 GAS8O95995 478 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 CHN1P15882 459 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 ITGA8P53708 1063 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 ATP13A4Q4VNC1 1196 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 WDR49Q8IV35 697 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 ELP3Q9H9T3 547 aa26.45■■□□□ 1.82
RAB40C-204ENST00000538492 TCF4P15884 667 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ITIH2P19823 946 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ADCY8P40145 1251 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 CDR1P51861 262 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 EFNA5P52803 228 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 C1QBPQ07021 282 aaKnown RBP26.44■■□□□ 1.82
RAB40C-204ENST00000538492 IFT88Q13099 833 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 PTK6Q13882 451 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 SPATS2Q86XZ4 545 aaKnown RBP26.44■■□□□ 1.82
RAB40C-204ENST00000538492 OTUD6BQ8N6M0 293 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 FEZF2Q8TBJ5 459 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ACO2Q99798 780 aaKnown RBP26.44■■□□□ 1.82
RAB40C-204ENST00000538492 OSBPL8Q9BZF1 889 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 CCDC113Q9H0I3 377 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 PARVAQ9NVD7 372 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 PRKCBP05771 671 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 GJB1P08034 283 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 TGFB3P10600 412 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 BRD2P25440 801 aaKnown RBP26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ZNF132P52740 706 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 OSTNP61366 133 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ZFYVE27Q5T4F4 411 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 MICALCLQ6ZW33 695 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ATL2Q8NHH9 583 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 GRK7Q8WTQ7 553 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 PWWP2AQ96N64 755 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 ADAM7Q9H2U9 754 aa26.44■■□□□ 1.82
RAB40C-204ENST00000538492 DDX20Q9UHI6 824 aaKnown RBP26.44■■□□□ 1.82
RAB40C-204ENST00000538492 PI4K2BG5E9Z4 385 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 LONRF1Q17RB8 773 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 CCDC38Q502W7 563 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 RHBDF2Q6PJF5 856 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 SCARA5Q6ZMJ2 495 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 CDR2LQ86X02 465 aaPredicted RBP26.43■■□□□ 1.82
RAB40C-204ENST00000538492 KATNAL2Q8IYT4 538 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 TRAPPC12Q8WVT3 735 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 ZBTB10Q96DT7 871 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 SCLT1Q96NL6 688 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 A0A0G2JMZ2 1700 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 NOP56O00567 594 aaKnown RBP26.43■■□□□ 1.82
RAB40C-204ENST00000538492 WEE2P0C1S8 567 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 ATF2P15336 505 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 MMP8P22894 467 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 MAN1A1P33908 653 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 MMP13P45452 471 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 TFAMQ00059 246 aaKnown RBP26.43■■□□□ 1.82
RAB40C-204ENST00000538492 IER5Q5VY09 327 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 PRUNE1Q86TP1 453 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 PACS2Q86VP3 889 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 RHPN2Q8IUC4 686 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 XPO6Q96QU8 1125 aaKnown RBP26.43■■□□□ 1.82
RAB40C-204ENST00000538492 FAM129AQ9BZQ8 928 aa26.43■■□□□ 1.82
RAB40C-204ENST00000538492 AUHQ13825 339 aaKnown RBP26.42■■□□□ 1.82
RAB40C-204ENST00000538492 MAPK6Q16659 721 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 RNF187Q5TA31 235 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-204ENST00000538492 TRMT10CQ7L0Y3 403 aaKnown RBP26.42■■□□□ 1.82
RAB40C-204ENST00000538492 UBR7Q8N806 425 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 BBXQ8WY36 941 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-204ENST00000538492 GPR20Q99678 358 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 CISHQ9NSE2 258 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 ZBTB42B2RXF5 422 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 DDNO94850 711 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-204ENST00000538492 AGTP01019 485 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 ERMARDQ5T6L9 678 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 KAZNQ674X7 775 aa26.42■■□□□ 1.82
RAB40C-204ENST00000538492 THNSL1Q8IYQ7 743 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms