RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TRHRP34981 398 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 ADCYAP1R1P41586 468 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 SEPHS1P49903 392 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MRPS9P82933 396 aaKnown RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 GRB10Q13322 594 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 NEDD9Q14511 834 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 SLC14A2Q15849 920 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 CALCRLQ16602 461 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 DUSP28Q4G0W2 176 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 BRDTQ58F21 947 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 TTC38Q5R3I4 469 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MAP3K21Q5TCX8 1036 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 FYB2Q5VWT5 728 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 IQSEC1Q6DN90 963 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 PPP4R3AQ6IN85 833 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MOXD1Q6UVY6 613 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 NIPA1Q7RTP0 329 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 TLK2Q86UE8 772 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 NAT16Q8N8M0 369 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 ANKS4BQ8N8V4 417 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 TMEM52Q8NDY8 209 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 ST13P5Q8NFI4 369 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 TRIM44Q96DX7 344 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF333Q96JL9 665 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MRGPRX3Q96LB0 322 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 DEFB118Q96PH6 123 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 SRPK1Q96SB4 655 aaKnown RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MXRA8Q9BRK3 442 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 SDF4Q9BRK5 362 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF577Q9BSK1 485 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MCMBPQ9BTE3 642 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 G6PC3Q9BUM1 346 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 PANK2Q9BZ23 570 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■■□□□ 14.4
SNHG1-208ENST00000538266 MLXIPQ9HAP2 919 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 JADE2Q9NQC1 790 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 XPNPEP3Q9NQH7 507 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 KCNH7Q9NS40 1196 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 TNFRSF10DQ9UBN6 386 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 DDX20Q9UHI6 824 aaKnown RBP4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MSRB2Q9Y3D2 182 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 UBIAD1Q9Y5Z9 338 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 MYH7BA7E2Y1 1941 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 KIAA1217Q5T5P2 1943 aa4.83□□□□□ -1.64
SNHG1-208ENST00000538266 CYP3A7-CYP3A51PA0A087WV96 503 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQU0 124 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 FITM1A5D6W6 292 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 KBTBD13C9JR72 458 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 LAD1O00515 517 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 AURKAO14965 403 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 RRP9O43818 475 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 SLC37A4O43826 429 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ZEB2O60315 1214 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 GAS7O60861 476 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 DUSP11O75319 330 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 BAG4O95429 457 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TDP2O95551 362 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 GGPS1O95749 300 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 BMP15O95972 392 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TFRCP02786 760 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 HPXP02790 462 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TPM2P07951 284 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 GJB1P08034 283 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 C6orf222P0C671 652 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 NCLP19338 710 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 UBA1P22314 1058 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CYP3A7P24462 503 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 HOXC12P31275 282 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ICAM3P32942 547 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 KIR2DL1P43626 348 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 KIR2DL2P43627 348 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CPT1AP50416 773 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 NUCB2P80303 420 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 SP4Q02446 784 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CHRNEQ04844 493 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CCDC173Q0VFZ6 552 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ORC2Q13416 577 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 FSCN1Q16658 493 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 LY6KQ17RY6 165 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TMEM266Q2M3C6 531 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 SLC10A6Q3KNW5 377 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 Q4G0T1 1027 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 EARS2Q5JPH6 523 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CELF3Q5SZQ8 465 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ANO1Q5XXA6 986 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 HLA-DQA1Q5Y7H0 255 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 GTF2IRD2BQ6EKJ0 949 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TAPT1Q6NXT6 567 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 METTL7BQ6UX53 244 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CEP128Q6ZU80 1094 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 RNF180Q86T96 592 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 GTF2IRD2Q86UP8 949 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF227Q86WZ6 799 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TRIM59Q8IWR1 403 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 DHX37Q8IY37 1157 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 PCSK9Q8NBP7 692 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ARRDC4Q8NCT1 418 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms