RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.57□□□□□ -0.4
SPARC-207ENST00000537849 WEE2P0C1S8 567 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 CCDC172P0C7W6 258 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 CHRNB2P17787 502 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 IGFBP6P24592 240 aaPredicted RBP12.57□□□□□ -0.4
SPARC-207ENST00000537849 RFC2P35250 354 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 ASPAP45381 313 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 SCNN1GP51170 649 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 WDR72Q3MJ13 1102 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 CLLU1OSQ5K130 101 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 CCAR2Q8N163 923 aaKnown RBP12.57□□□□□ -0.4
SPARC-207ENST00000537849 LRRC52Q8N7C0 313 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 SLC30A5Q8TAD4 765 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 CCDC42Q96M95 316 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 IMPG2Q9BZV3 1241 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 SDCBP2Q9H190 292 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 TMEM161AQ9NX61 479 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 NXF1Q9UBU9 619 aaKnown RBP12.57□□□□□ -0.4
SPARC-207ENST00000537849 NENFQ9UMX5 172 aa12.57□□□□□ -0.4
SPARC-207ENST00000537849 A0A087X0T9 212 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.4
SPARC-207ENST00000537849 SPTLC1O15269 473 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 ZNF500O60304 480 aaPredicted RBP12.56□□□□□ -0.4
SPARC-207ENST00000537849 FAM228BP0C875 321 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 CYLC1P35663 651 aaPredicted RBP12.56□□□□□ -0.4
SPARC-207ENST00000537849 USP8P40818 1118 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 ZNF132P52740 706 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 CDH8P55286 799 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 LIMS2Q7Z4I7 341 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 ACRBPQ8NEB7 543 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
SPARC-207ENST00000537849 AGPAT1Q99943 283 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 DESI2Q9BSY9 194 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 CYP3A43Q9HB55 503 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 ACP6Q9NPH0 428 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 CISHQ9NSE2 258 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 SLC38A7Q9NVC3 462 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 NOCTQ9UK39 431 aaKnown RBP12.56□□□□□ -0.4
SPARC-207ENST00000537849 PPP2R2CQ9Y2T4 447 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 PCDHB4Q9Y5E5 795 aa12.56□□□□□ -0.4
SPARC-207ENST00000537849 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 POMCP01189 267 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 CALCAP01258 141 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 KRT5P13647 590 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 IBSPP21815 317 aaPredicted RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 ANXA13P27216 316 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 KIF11P52732 1056 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 LILRA4P59901 499 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 CYP27A1Q02318 531 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 MYO1EQ12965 1108 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 MFSD5Q6N075 450 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 CNKSR3Q6P9H4 555 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 CD300LGQ6UXG3 332 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 SLC47A2Q86VL8 602 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 LNX1Q8TBB1 728 aaPredicted RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 WHAMMQ8TF30 809 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 SLC20A1Q8WUM9 679 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 ATRIPQ8WXE1 791 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 SMYD3Q9H7B4 428 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 GDAP2Q9NXN4 497 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 ADAMTS1Q9UHI8 967 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 R3HCC1Q9Y3T6 440 aaKnown RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 PCDHB7Q9Y5E2 793 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 MYH10P35580 1976 aa12.55□□□□□ -0.4
SPARC-207ENST00000537849 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
SPARC-207ENST00000537849 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 AKR1B10O60218 316 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 DDHD2O94830 711 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 FAM163BP0C2L3 166 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 FGFR1P11362 822 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 P4HA1P13674 534 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 CYP11B1P15538 503 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 RAG1P15918 1043 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 TNFAIP3P21580 790 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
SPARC-207ENST00000537849 PNPLA4P41247 253 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 RAP1GAPP47736 663 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 TAF6P49848 677 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 BPIFB4P59827 614 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
SPARC-207ENST00000537849 GRIK3Q13003 919 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 IKBKEQ14164 716 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
SPARC-207ENST00000537849 SLC18A3Q16572 532 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 UPP1Q16831 310 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 TMEM270Q6UE05 265 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 GLB1LQ6UWU2 654 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms