RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PPP3CBP16298 524 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 CCKARP32238 428 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 NXPH1P58417 271 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 MRPS9P82933 396 aaKnown RBP3.44□□□□□ -1.86
SKA3-207ENST00000536239 DYRK1AQ13627 763 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 PROSER3Q2NL68 480 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 SUPT20HL1Q3ZLR7 823 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 MUM1L1Q5H9M0 696 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 PPM1KQ8N3J5 372 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 AUTS2Q8WXX7 1259 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 HMCESQ96FZ2 354 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 SH2D3AQ9BRG2 576 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 OSBPL2Q9H1P3 480 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 TOPORSQ9NS56 1045 aaPredicted RBP3.44□□□□□ -1.86
SKA3-207ENST00000536239 KLC4Q9NSK0 619 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 CTTNBP2NLQ9P2B4 639 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 RUVBL1Q9Y265 456 aaKnown RBP3.44□□□□□ -1.86
SKA3-207ENST00000536239 CD2APQ9Y5K6 639 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 CCDC187A0A096LP49 1063 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 KIAA0391O15091 583 aaKnown RBP3.43□□□□□ -1.86
SKA3-207ENST00000536239 GPR32O75388 356 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 ENDOD1O94919 500 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 CYP2D6P10635 497 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 DRD4P21917 467 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 SLC6A9P48067 706 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 CCT8P50990 548 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 HNRNPMP52272 730 aaKnown RBP eCLIP3.43□□□□□ -1.86
SKA3-207ENST00000536239 MTM1Q13496 603 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 TCEA2Q15560 299 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 NFE2L2Q16236 605 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 ATP13A4Q4VNC1 1196 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 CEP78Q5JTW2 689 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 SLC2A7Q6PXP3 512 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 CAMKK1Q8N5S9 505 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 NLGN4YQ8NFZ3 816 aaPredicted RBP3.43□□□□□ -1.86
SKA3-207ENST00000536239 ADAMTS15Q8TE58 950 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 CYFIP2Q96F07 1278 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 FEZ1Q99689 392 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 TLR10Q9BXR5 811 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 IFT122Q9HBG6 1241 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 DMRT3Q9NQL9 472 aa3.43□□□□□ -1.86
SKA3-207ENST00000536239 CCDC9Q9Y3X0 531 aaKnown RBP3.43□□□□□ -1.86
SKA3-207ENST00000536239 TUBB4AP04350 444 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 SFPQP23246 707 aaKnown RBP eCLIP3.42□□□□□ -1.86
SKA3-207ENST00000536239 MMP13P45452 471 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 ZNF134P52741 427 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 ITIH3Q06033 890 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 SEPT2Q15019 361 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 MUM1Q2TAK8 710 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 MIDNQ504T8 468 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 DACT2Q5SW24 774 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 KRT73Q86Y46 540 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 ADGRG5Q8IZF4 528 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 B3GALNT2Q8NCR0 500 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 NINJ1Q92982 152 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 PBKQ96KB5 322 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 C8orf37Q96NL8 207 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 TMEM79Q9BSE2 394 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 TARS2Q9BW92 718 aaKnown RBP3.42□□□□□ -1.86
SKA3-207ENST00000536239 VPS16Q9H269 839 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 EBF3Q9H4W6 596 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 TUBA8Q9NY65 449 aaPredicted RBP3.42□□□□□ -1.86
SKA3-207ENST00000536239 WWOXQ9NZC7 414 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 PCDHB1Q9Y5F3 818 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 ADGRA2Q96PE1 1338 aa3.42□□□□□ -1.86
SKA3-207ENST00000536239 MYO15BQ96JP2 1530 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 CYSRT1A8MQ03 144 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 SUN1O94901 812 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 AMY1AP04745 511 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 NHLRC4P0CG21 123 aaPredicted RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 NR2F6P10588 404 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 MCAMP43121 646 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 ANXA11P50995 505 aaKnown RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 ZNF844Q08AG5 666 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 BMS1Q14692 1282 aaKnown RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 HLXQ14774 488 aaPredicted RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 ANO4Q32M45 955 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 GLIPR1L2Q4G1C9 344 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 PREPLQ4J6C6 727 aaPredicted RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 ZGPATQ8N5A5 531 aaKnown RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.41□□□□□ -1.86
SKA3-207ENST00000536239 CCHCR1Q8TD31 782 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 SNX19Q92543 992 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 RFKQ969G6 155 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 ADI1Q9BV57 179 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 ACE2Q9BYF1 805 aaPredicted RBP3.41□□□□□ -1.86
SKA3-207ENST00000536239 CDYLQ9Y232 598 aa3.41□□□□□ -1.86
SKA3-207ENST00000536239 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 TISP43B9A030 160 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 JTBO76095 146 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 HAUS5O94927 633 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 AGFG2O95081 481 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 MTHFD2P13995 350 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 GSPT1P15170 499 aaKnown RBP3.4□□□□□ -1.87
SKA3-207ENST00000536239 DDCP20711 480 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 SLC6A4P31645 630 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 PLCD1P51178 756 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 ATP8B2P98198 1209 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 CREMQ03060 361 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms