RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 GPR88Q9GZN0 384 aa8.79□□□□□ -1
CHFR-211ENST00000535897 ANKFY1Q9P2R3 1169 aa8.79□□□□□ -1
CHFR-211ENST00000535897 DAXXQ9UER7 740 aaPredicted RBP8.79□□□□□ -1
CHFR-211ENST00000535897 KIAA1024Q9UPX6 916 aa8.79□□□□□ -1
CHFR-211ENST00000535897 YIPF1Q9Y548 306 aa8.79□□□□□ -1
CHFR-211ENST00000535897 CITO14578 2027 aa8.79□□□□□ -1
CHFR-211ENST00000535897 ZFHX4Q86UP3 3567 aa8.79□□□□□ -1
CHFR-211ENST00000535897 SPECC1L-ADORA2AF8WAN1 911 aa8.78□□□□□ -1
CHFR-211ENST00000535897 MOSPD3O75425 235 aa8.78□□□□□ -1
CHFR-211ENST00000535897 LARGE1O95461 756 aa8.78□□□□□ -1
CHFR-211ENST00000535897 MCF2P10911 925 aa8.78□□□□□ -1
CHFR-211ENST00000535897 KCNE1P15382 129 aa8.78□□□□□ -1
CHFR-211ENST00000535897 MATR3P43243 847 aaKnown RBP eCLIP8.78□□□□□ -1
CHFR-211ENST00000535897 NPTX2P47972 431 aa8.78□□□□□ -1
CHFR-211ENST00000535897 EPHB3P54753 998 aa8.78□□□□□ -1
CHFR-211ENST00000535897 YWHAHQ04917 246 aaPredicted RBP8.78□□□□□ -1
CHFR-211ENST00000535897 PTGDRQ13258 359 aa8.78□□□□□ -1
CHFR-211ENST00000535897 PLD1Q13393 1074 aa8.78□□□□□ -1
CHFR-211ENST00000535897 GNL2Q13823 731 aaKnown RBP8.78□□□□□ -1
CHFR-211ENST00000535897 MRPL58Q14197 206 aaKnown RBP8.78□□□□□ -1
CHFR-211ENST00000535897 GAS6Q14393 721 aa8.78□□□□□ -1
CHFR-211ENST00000535897 ME3Q16798 604 aa8.78□□□□□ -1
CHFR-211ENST00000535897 SEZ6Q53EL9 994 aa8.78□□□□□ -1
CHFR-211ENST00000535897 XKR4Q5GH76 650 aa8.78□□□□□ -1
CHFR-211ENST00000535897 DGKKQ5KSL6 1271 aa8.78□□□□□ -1
CHFR-211ENST00000535897 MPZL3Q6UWV2 235 aa8.78□□□□□ -1
CHFR-211ENST00000535897 ALKAL1Q6UXT8 129 aa8.78□□□□□ -1
CHFR-211ENST00000535897 USP37Q86T82 979 aa8.78□□□□□ -1
CHFR-211ENST00000535897 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
CHFR-211ENST00000535897 NSUN7Q8NE18 718 aaKnown RBP8.78□□□□□ -1
CHFR-211ENST00000535897 SHKBP1Q8TBC3 707 aa8.78□□□□□ -1
CHFR-211ENST00000535897 ZFYVE19Q96K21 471 aa8.78□□□□□ -1
CHFR-211ENST00000535897 SUSD3Q96L08 255 aa8.78□□□□□ -1
CHFR-211ENST00000535897 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
CHFR-211ENST00000535897 TRPV4Q9HBA0 871 aa8.78□□□□□ -1
CHFR-211ENST00000535897 KMT5AQ9NQR1 393 aa8.78□□□□□ -1
CHFR-211ENST00000535897 DDX19AQ9NUU7 478 aaKnown RBP8.78□□□□□ -1
CHFR-211ENST00000535897 CNTN3Q9P232 1028 aa8.78□□□□□ -1
CHFR-211ENST00000535897 LRWD1Q9UFC0 647 aa8.78□□□□□ -1
CHFR-211ENST00000535897 TUBGCP4Q9UGJ1 667 aa8.78□□□□□ -1
CHFR-211ENST00000535897 ANGPTL2Q9UKU9 493 aa8.78□□□□□ -1
CHFR-211ENST00000535897 MAFFQ9ULX9 164 aa8.78□□□□□ -1
CHFR-211ENST00000535897 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
CHFR-211ENST00000535897 NCANO14594 1321 aa8.78□□□□□ -1
CHFR-211ENST00000535897 K7ESF4 209 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 ARNTLO00327 626 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 AXIN1O15169 862 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 CHADO15335 359 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 HIP1RO75146 1068 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 OR4Q2P0C623 313 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 MUTP22033 750 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 ALDH1A3P47895 512 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 EPHA5P54756 1037 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 MLLT6P55198 1093 aaPredicted RBP8.77□□□□□ -1.01
CHFR-211ENST00000535897 SPAG1Q07617 926 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 FCHO2Q0JRZ9 810 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 STRN3Q13033 797 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 DUSP4Q13115 394 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 PON2Q15165 354 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 SF3A2Q15428 464 aaKnown RBP8.77□□□□□ -1.01
CHFR-211ENST00000535897 CCDC6Q16204 474 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 ARHGAP15Q53QZ3 475 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 STXBP5Q5T5C0 1151 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 DSTYKQ6XUX3 929 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 RALGPS2Q86X27 583 aaPredicted RBP8.77□□□□□ -1.01
CHFR-211ENST00000535897 SNX29Q8TEQ0 813 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 RSPRY1Q96DX4 576 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 DRC1Q96MC2 740 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 ARRDC1-AS1Q9H2J1 176 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 ATXN3LQ9H3M9 355 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 GTSE1Q9NYZ3 720 aa8.77□□□□□ -1.01
CHFR-211ENST00000535897 TIMM13Q9Y5L4 95 aaPredicted RBP8.77□□□□□ -1.01
CHFR-211ENST00000535897 FRYQ5TBA9 3013 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 SDK1Q7Z5N4 2213 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 E9PMD0 336 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 SLC16A4O15374 487 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 RPP40O75818 363 aaKnown RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 PAPSS2O95340 614 aaPredicted RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 CCDC192P0DO97 292 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 CTHP32929 405 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 PXNP49023 591 aaPredicted RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 ORC2Q13416 577 aaPredicted RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 NOLC1Q14978 699 aaKnown RBP eCLIP8.76□□□□□ -1.01
CHFR-211ENST00000535897 ZRSR1Q15695 479 aaKnown RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 ECM1Q16610 540 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 ARHGAP29Q52LW3 1261 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 TTC38Q5R3I4 469 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 GPR158Q5T848 1215 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 TXNDC11Q6PKC3 985 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 TMC8Q8IU68 726 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 ARID3BQ8IVW6 561 aaPredicted RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 KIF12Q96FN5 646 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 C8orf76Q96K31 380 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 GCNAQ96QF7 691 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 OXCT2Q9BYC2 517 aaPredicted RBP8.76□□□□□ -1.01
CHFR-211ENST00000535897 RAB34Q9BZG1 259 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 TMEM134Q9H6X4 195 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 PTPRHQ9HD43 1115 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 C2orf42Q9NWW7 574 aa8.76□□□□□ -1.01
CHFR-211ENST00000535897 NOL7Q9UMY1 257 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms