RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 CXorf38Q8TB03 319 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 ATG4AQ8WYN0 398 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 SCLT1Q96NL6 688 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 ARHGAP39Q9C0H5 1083 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 SMYD3Q9H7B4 428 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 GTF3C4Q9UKN8 822 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 ZSWIM8A7E2V4 1837 aa9.79□□□□□ -0.84
LINC00943-203ENST00000535544 A0A0U1RQG5 324 aaPredicted RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 STRNO43815 780 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TMEM191BP0C7N4 346 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 OGDHQ02218 1023 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 SNX1Q13596 522 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 HLTFQ14527 1009 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 WDR49Q8IV35 697 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 C1orf54Q8WWF1 131 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ZMAT2Q96NC0 199 aaKnown RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 OSMRQ99650 979 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 OSBPL7Q9BZF2 842 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 VTA1Q9NP79 307 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RNF14Q9UBS8 474 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 MYADML2A6NDP7 307 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 MAPK4P31152 587 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 HOXA11P31270 313 aaPredicted RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TUBB4BP68371 445 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TNFAIP2Q03169 654 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 MAMLD1Q13495 774 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 FAM110CQ1W6H9 321 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RAB6CQ53S08 254 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 DNAJC21Q5F1R6 531 aaKnown RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 KCTD16Q68DU8 428 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TTC19Q6DKK2 380 aaPredicted RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 KCNN1Q92952 543 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RAB6CQ9H0N0 254 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ADAM22Q9P0K1 906 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 CACNG4Q9UBN1 327 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 PI4K2BG5E9Z4 385 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TREHO43280 583 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TSPAN1O60635 241 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RNF40O75150 1001 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ZC3H11AO75152 810 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RARAP10276 462 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TMOD1P28289 359 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 NSFP46459 744 aaKnown RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ZNF132P52740 706 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 CENPCQ03188 943 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ZNF252P-AS1Q0IIN9 211 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TRPC3Q13507 836 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 SIX1Q15475 284 aaPredicted RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ZNF699Q32M78 642 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 DENND1BQ6P3S1 775 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 SH2D3CQ8N5H7 860 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 C12orf29Q8N999 325 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 ZIM3Q96PE6 472 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 APOL6Q9BWW8 343 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RABEP2Q9H5N1 569 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 RPF1Q9H9Y2 349 aaKnown RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 TNFSF13BQ9Y275 285 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 R3HDM2Q9Y2K5 976 aaKnown RBP9.78□□□□□ -0.84
LINC00943-203ENST00000535544 SNX24Q9Y343 169 aa9.78□□□□□ -0.84
LINC00943-203ENST00000535544 F8VP50 259 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 AKAP5P24588 427 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 GCLCP48506 637 aaPredicted RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 UAP1Q16222 522 aaPredicted RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 SKIDA1Q1XH10 827 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 ZNF484Q5JVG2 852 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 C11orf63Q6NUN7 778 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 IFT20Q8IY31 132 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 WHAMMQ8TF30 809 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 DNAJB3Q8WWF6 145 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 CARD9Q9H257 536 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 ABHD16BQ9H3Z7 469 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 CHST7Q9NS84 486 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 SNTG2Q9NY99 539 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 NME7Q9Y5B8 376 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 POLR2BP30876 1174 aaKnown RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 SLC26A2P50443 739 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 HADHBP55084 474 aaKnown RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 TNNC1P63316 161 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 TRIM32Q13049 653 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 TRIP13Q15645 432 aaPredicted RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 RASAL3Q86YV0 1011 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 C18orf25Q96B23 403 aaPredicted RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 PARK7Q99497 189 aaKnown RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 KLK14Q9P0G3 267 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 CNTN6Q9UQ52 1028 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 GNEQ9Y223 722 aaKnown RBP9.77□□□□□ -0.85
LINC00943-203ENST00000535544 PCDHA3Q9Y5H8 950 aa9.77□□□□□ -0.85
LINC00943-203ENST00000535544 CES2O00748 559 aa9.76□□□□□ -0.85
LINC00943-203ENST00000535544 B4GALT4O60513 344 aa9.76□□□□□ -0.85
LINC00943-203ENST00000535544 ZNF865P0CJ78 1059 aaPredicted RBP9.76□□□□□ -0.85
LINC00943-203ENST00000535544 CD19P15391 556 aa9.76□□□□□ -0.85
LINC00943-203ENST00000535544 CTNNA1P35221 906 aaKnown RBP9.76□□□□□ -0.85
LINC00943-203ENST00000535544 SSR1P43307 286 aaKnown RBP9.76□□□□□ -0.85
LINC00943-203ENST00000535544 EPHB4P54760 987 aa9.76□□□□□ -0.85
LINC00943-203ENST00000535544 TFDP1Q14186 410 aa9.76□□□□□ -0.85
LINC00943-203ENST00000535544 CCDC142Q17RM4 750 aa9.76□□□□□ -0.85
LINC00943-203ENST00000535544 SGSM1Q2NKQ1 1148 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms