RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 STRN3Q13033 797 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 PPP2R5DQ14738 602 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 NOLC1Q14978 699 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 PTPAQ15257 358 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 SF3A1Q15459 793 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 ZBTB6Q15916 424 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 CSRP2Q16527 193 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 SLC8B1Q6J4K2 584 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 ZNF852Q6ZMS4 543 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 FGF13Q92913 245 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 CCSER1Q9C0I3 900 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 LARSQ9P2J5 1176 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 MRPS17Q9Y2R5 130 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 ANKRD11Q6UB99 2663 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 TTC26A0AVF1 554 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 H0YCG3 227 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 I3L4J1 428 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 SYN3O14994 580 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 TRAPPC3O43617 180 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 ABLIM3O94929 683 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 C8AP07357 584 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 PLCG1P19174 1290 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 SCP2P22307 547 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 DDIT3P35638 169 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 UBA7P41226 1012 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 CACNB1Q02641 598 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 ADCY1Q08828 1119 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 MCM6Q14566 821 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 KARSQ15046 597 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 AXDND1Q5T1B0 1012 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 ANKS3Q6ZW76 656 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 HAUS6Q7Z4H7 955 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 RAD54LQ92698 747 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 C18orf25Q96B23 403 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 CALML4Q96GE6 196 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 CDK5RAP3Q96JB5 506 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 REEP2Q9BRK0 252 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 TCHPQ9BT92 498 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 ZMIZ1Q9ULJ6 1067 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 NDRG2Q9UN36 371 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 POLIQ9UNA4 740 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 CLIC4Q9Y696 253 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 CDY1Q9Y6F8 540 aa10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 MORC2Q9Y6X9 1032 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-203ENST00000534830 ZFYVE26Q68DK2 2539 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 ARHGEF37A1IGU5 675 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 CLDN3O15551 220 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 LRPAP1P30533 357 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 GTF2BQ00403 316 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 RESTQ13127 1097 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 AASDHQ4L235 1098 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 SEZ6Q53EL9 994 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 PPM1LQ5SGD2 360 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 LIN9Q5TKA1 542 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 GPBP1Q86WP2 473 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 TMEM130Q8N3G9 435 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 ZNF461Q8TAF7 563 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 LARP4BQ92615 738 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 INTS4Q96HW7 963 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 SUSD3Q96L08 255 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 BACH2Q9BYV9 841 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 AVENQ9NQS1 362 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 HEBP1Q9NRV9 189 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 DNMT3BQ9UBC3 853 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 TBX20Q9UMR3 447 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 SCN1AP35498 2009 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 SDK1Q7Z5N4 2213 aa10.97□□□□□ -0.65
CLSTN3-203ENST00000534830 F5P12259 2224 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 WDR27A2RRH5 827 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 C1QTNF9BB2RNN3 333 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 M0QZQ0 153 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 CCL16O15467 120 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 TRAK2O60296 914 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 FOXD2O60548 495 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 CLTAP09496 248 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 C1QTNF9P0C862 333 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 CXCL8P10145 99 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 TDGF1P13385 188 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 ATF2P15336 505 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 CYP3A5P20815 502 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 PDCP20941 246 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 SYT1P21579 422 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 TNFSF9P41273 254 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 AARSP49588 968 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 ROR1Q01973 937 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 FZD5Q13467 585 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 POTEHQ6S545 545 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 MYCT1Q8N699 235 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 ITFG1Q8TB96 612 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 SLC7A14Q8TBB6 771 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 DDX12PQ92771 950 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 EPSTI1Q96J88 318 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 TSPAN18Q96SJ8 248 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 STRA6Q9BX79 667 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 ST6GALNAC4Q9H4F1 302 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms