RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SPPL3Q8TCT6 385 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
CTTN-215ENST00000533931 NDST4Q9H3R1 872 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 RAB20Q9NX57 234 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 LMCD1Q9NZU5 365 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 DSEQ9UL01 958 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 PCDHB8Q9UN66 801 aa16.77■□□□□ 0.28
CTTN-215ENST00000533931 LAMA3Q16787 3333 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 NT5C1B-RDH14C9J2C7 533 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 PPEF2O14830 753 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
CTTN-215ENST00000533931 HLA-DRAP01903 254 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 CYP11A1P05108 521 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 ODC1P11926 461 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 P4HA1P13674 534 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 TYMPP19971 482 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 CDK11BP21127 795 aaKnown RBP16.76■□□□□ 0.27
CTTN-215ENST00000533931 FGFR3P22607 806 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 CREMQ03060 361 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 KRT31Q15323 416 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 USP41Q3LFD5 358 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 MIIPQ5JXC2 388 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 LIMS2Q7Z4I7 341 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 LUZP1Q86V48 1076 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 APPL2Q8NEU8 664 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 TAS1R2Q8TE23 839 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 ARNTL2Q8WYA1 636 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
CTTN-215ENST00000533931 CACNG4Q9UBN1 327 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 IRAK3Q9Y616 596 aa16.76■□□□□ 0.27
CTTN-215ENST00000533931 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
CTTN-215ENST00000533931 SPTLC1O15269 473 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 POU3F3P20264 500 aaPredicted RBP16.75■□□□□ 0.27
CTTN-215ENST00000533931 MYL6P60660 151 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 DSG1Q02413 1049 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 PTPROQ16827 1216 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 ZNF699Q32M78 642 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 TIGD5Q53EQ6 642 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
CTTN-215ENST00000533931 TMEM86AQ8N2M4 240 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 TOP6BLQ8N6T0 577 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 VN1R3Q9BXE9 311 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 GPR62Q9BZJ7 368 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 ZBP1Q9H171 429 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 TTYH1Q9H313 450 aaPredicted RBP16.75■□□□□ 0.27
CTTN-215ENST00000533931 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
CTTN-215ENST00000533931 MTUS1Q9ULD2 1270 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 NLRC5Q86WI3 1866 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 TRIP11Q15643 1979 aa16.75■□□□□ 0.27
CTTN-215ENST00000533931 LGALS16A8MUM7 142 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 F8W810 466 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 C1RP00736 705 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 URODP06132 367 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 CTSAP10619 480 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 GLUD2P49448 558 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 COPB1P53618 953 aaKnown RBP16.74■□□□□ 0.27
CTTN-215ENST00000533931 ZNF667Q5HYK9 610 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 WDR44Q5JSH3 913 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 DSTYKQ6XUX3 929 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 SPRED2Q7Z698 418 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 VPS52Q8N1B4 723 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 TTC39CQ8N584 583 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 POF1BQ8WVV4 589 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 PIK3R5Q8WYR1 880 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 FAM84AQ96KN4 292 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 FAM81BQ96LP2 452 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 TTPALQ9BTX7 342 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 MMRN2Q9H8L6 949 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 CHD7Q9P2D1 2997 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 TRANK1O15050 2925 aa16.74■□□□□ 0.27
CTTN-215ENST00000533931 FSCN2O14926 492 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 GRM6O15303 877 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 HUS1O60921 280 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 TACC1O75410 805 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 OAZ2O95190 189 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 BRCC3P46736 316 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 TNNC1P63316 161 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 NOP14P78316 857 aaKnown RBP16.73■□□□□ 0.27
CTTN-215ENST00000533931 SMC1AQ14683 1233 aaKnown RBP16.73■□□□□ 0.27
CTTN-215ENST00000533931 WDR72Q3MJ13 1102 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 FILIP1LQ4L180 1135 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 HSP90AA4PQ58FG1 418 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 FAM171A1Q5VUB5 890 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 ANKS3Q6ZW76 656 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 EHBP1Q8NDI1 1231 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 LMO3Q8TAP4 145 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 HASPINQ8TF76 798 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 JAKMIP2Q96AA8 810 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
CTTN-215ENST00000533931 LRCH3Q96II8 777 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 NIF3L1Q9GZT8 377 aa16.73■□□□□ 0.27
CTTN-215ENST00000533931 CYP3A43Q9HB55 503 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms