RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GOLGA8IPA6NC78 632 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 GOLGA8JA6NMD2 632 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 M0QZQ0 153 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 TBC1D4O60343 1298 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ABLIM3O94929 683 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 RHOP08100 348 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ODC1P11926 461 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ATF2P15336 505 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ADSSP30520 456 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ME1P48163 572 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 NHLH1Q02575 133 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 HTR4Q13639 388 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
CAPN1-225ENST00000533704 POSTNQ15063 836 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 C9orf57Q5W0N0 161 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 SHC4Q6S5L8 630 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 SENP8Q96LD8 212 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 TSPAN18Q96SJ8 248 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 LRRC27Q9C0I9 530 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 TNMDQ9H2S6 317 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 PCIF1Q9H4Z3 704 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ASB7Q9H672 318 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 OLFML3Q9NRN5 406 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 AFF4Q9UHB7 1163 aaKnown RBP11.31□□□□□ -0.6
CAPN1-225ENST00000533704 INSL5Q9Y5Q6 135 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 STYXL1Q9Y6J8 313 aa11.31□□□□□ -0.6
CAPN1-225ENST00000533704 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 SPTLC1O15269 473 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 IL18RAPO95256 599 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 ADRB2P07550 413 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 POU2F2P09086 479 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 PTPN2P17706 415 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 CDR1P51861 262 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 PTPN5P54829 565 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 LILRA4P59901 499 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
CAPN1-225ENST00000533704 AMPD3Q01432 767 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 DNM1Q05193 864 aaKnown RBP11.3□□□□□ -0.6
CAPN1-225ENST00000533704 TWF1Q12792 350 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 ALCAMQ13740 583 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-225ENST00000533704 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 PARM1Q6UWI2 310 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 CRELD2Q6UXH1 353 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-225ENST00000533704 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 TCEAL8Q8IYN2 117 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 FGF14Q92915 247 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 PRRX2Q99811 253 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 KXD1Q9BQD3 176 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 CBWD1Q9BRT8 395 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 RPP25Q9BUL9 199 aaKnown RBP11.3□□□□□ -0.6
CAPN1-225ENST00000533704 STRA6Q9BX79 667 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 FAM13BQ9NYF5 915 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 DERAQ9Y315 318 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 C2CD2Q9Y426 696 aa11.3□□□□□ -0.6
CAPN1-225ENST00000533704 ZFP37Q9Y6Q3 630 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-225ENST00000533704 OR6C75A6NL08 312 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 ANHXE9PGG2 379 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 PIRO00625 290 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 POLR2DO15514 142 aaKnown RBP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 OAZ2O95190 189 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 SRFP11831 508 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 MYL4P12829 197 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 PDIA4P13667 645 aaKnown RBP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 CEBPBP17676 345 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 TYMPP19971 482 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 CASP1P29466 404 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 AFMP43652 599 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 TAF6P49848 677 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 E2F4Q16254 413 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 CYP4A22Q5TCH4 519 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 IQCEQ6IPM2 695 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 MTSS1LQ765P7 747 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 METTL23Q86XA0 190 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 BRSK2Q8IWQ3 736 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 NPAS3Q8IXF0 933 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 GPR152Q8TDT2 470 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 TCEAL4Q96EI5 215 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 FAM84AQ96KN4 292 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms