RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 VNN1O95497 513 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 ODC1P11926 461 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 MYOGP15173 224 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 TRIM21P19474 475 aaKnown RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 TBXAS1P24557 533 aaPredicted RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 AARSP49588 968 aaKnown RBP eCLIP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 YWHAEP62258 255 aaKnown RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 EPC2Q52LR7 807 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 DDX53Q86TM3 631 aaKnown RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 GPR65Q8IYL9 337 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 CXorf38Q8TB03 319 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 SUSD3Q96L08 255 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 OXCT2Q9BYC2 517 aaPredicted RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 GCNT4Q9P109 453 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 YBX2Q9Y2T7 364 aaKnown RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 TDRD15B5MCY1 1934 aaKnown RBP22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 CEP290O15078 2479 aa22.68■■□□□ 1.22
PTP4A2-215ENST00000533408 RFX1P22670 979 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 PBX2P40425 430 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 PLCB2Q00722 1185 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 PDE12Q6L8Q7 609 aaKnown RBP22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 KIAA1841Q6NSI8 718 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 SARM1Q6SZW1 724 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 ENOSF1Q7L5Y1 443 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 TMEM86AQ8N2M4 240 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 TOP6BLQ8N6T0 577 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 FBXO22Q8NEZ5 403 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 IQCDQ96DY2 449 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 PCMTD1Q96MG8 357 aaPredicted RBP22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 PAAF1Q9BRP4 392 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 CYP3A43Q9HB55 503 aa22.67■■□□□ 1.22
PTP4A2-215ENST00000533408 A0A1W2PQC6 194 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 GOLGA6L3A6NEY3 463 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 NT5C1B-RDH14C9J2C7 533 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 M0QZQ0 153 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 B4GALT3O60512 393 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 NOP14P78316 857 aaKnown RBP22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 NR1I3Q14994 352 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 USP41Q3LFD5 358 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 FUT10Q6P4F1 479 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 APTXQ7Z2E3 356 aaKnown RBP22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 KLHL23Q8NBE8 558 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 JAKMIP2Q96AA8 810 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 SENP8Q96LD8 212 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 ERGIC2Q96RQ1 377 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 MMS19Q96T76 1030 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 INTS2Q9H0H0 1204 aaKnown RBP22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 XYLT2Q9H1B5 865 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 PCDHB8Q9UN66 801 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 SNX9Q9Y5X1 595 aa22.66■■□□□ 1.22
PTP4A2-215ENST00000533408 ANK1P16157 1881 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 CYB561D2O14569 222 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 LPXNO60711 386 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 TYMPP19971 482 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 CREMQ03060 361 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 THEM5Q8N1Q8 247 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 TRIM5Q9C035 493 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 NIF3L1Q9GZT8 377 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 LMAN2LQ9H0V9 348 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 MARCH5Q9NX47 278 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 IFNKQ9P0W0 207 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 HCSTQ9UBK5 93 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 NXF1Q9UBU9 619 aaKnown RBP22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 PTPRSQ13332 1948 aa22.65■■□□□ 1.22
PTP4A2-215ENST00000533408 H3BNC9 293 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 H7C4K7 107 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 SOD2P04179 222 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 LINC00271P0C7V0 271 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 PON1P27169 355 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 LHX1P48742 406 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 GCNT1Q02742 428 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 TIGD5Q53EQ6 642 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 FAM171A1Q5VUB5 890 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 TRIM65Q6PJ69 517 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 C3orf58Q8NDZ4 430 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 RABGGTAQ92696 567 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 SEMA4DQ92854 862 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 C17orf80Q9BSJ5 609 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 CRACR2AQ9BSW2 395 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 TTPALQ9BTX7 342 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 PLCB1Q9NQ66 1216 aa22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 PDCD11Q14690 1871 aaKnown RBP22.64■■□□□ 1.21
PTP4A2-215ENST00000533408 TACC1O75410 805 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 CYP11A1P05108 521 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 PBX3P40426 434 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 MFAP3P55082 362 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 GPM6BQ13491 265 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 ANKS3Q6ZW76 656 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 FMNL3Q8IVF7 1028 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 NEK11Q8NG66 645 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 LMO3Q8TAP4 145 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 HASPINQ8TF76 798 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 NAP1L5Q96NT1 182 aaPredicted RBP22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 NUP58Q9BVL2 599 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 NGRNQ9NPE2 291 aaKnown RBP22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 CACNG4Q9UBN1 327 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 APEX2Q9UBZ4 518 aa22.63■■□□□ 1.21
PTP4A2-215ENST00000533408 PPEF2O14830 753 aa22.62■■□□□ 1.21
PTP4A2-215ENST00000533408 TNRC18O15417 2968 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms