RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 FAM228BP0C875 321 aa23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 IBSPP21815 317 aaPredicted RBP23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 PSRC1Q6PGN9 363 aaPredicted RBP23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 ENOSF1Q7L5Y1 443 aa23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 UBR7Q8N806 425 aa23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 TET1Q8NFU7 2136 aa23.55■■□□□ 1.36
PACSIN3-209ENST00000532457 PDCD11Q14690 1871 aaKnown RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 RCCD1A6NED2 376 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 H0YGN5 161 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 CYLC1P35663 651 aaPredicted RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 ASPAP45381 313 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 RBP5P82980 135 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 IKBKEQ14164 716 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 ZNF598Q86UK7 904 aaKnown RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 SLC47A2Q86VL8 602 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 SLC20A1Q8WUM9 679 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 PPP1R10Q96QC0 940 aaKnown RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 GOLGA2P5Q9HBQ8 144 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 NXF1Q9UBU9 619 aaKnown RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 BZW2Q9Y6E2 419 aaKnown RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 PDE4DIPQ5VU43 2346 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 AKR1B10O60218 316 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 FGBP02675 491 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 WEE2P0C1S8 567 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 IGFBP6P24592 240 aaPredicted RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 MLH1P40692 756 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 MAGEA10P43363 369 aaPredicted RBP23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 WDR72Q3MJ13 1102 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 ECHDC2Q86YB7 292 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 RNF169Q8NCN4 708 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 HPDLQ96IR7 371 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 IMPG2Q9BZV3 1241 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 NIF3L1Q9GZT8 377 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 DEF6Q9H4E7 631 aa23.54■■□□□ 1.36
PACSIN3-209ENST00000532457 SCN1AP35498 2009 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 ANO9A1A5B4 782 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 ARL5CA6NH57 179 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 C9IYK1 514 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 DDX3XO00571 662 aaKnown RBP eCLIP23.53■■□□□ 1.365e-8■■□□□ 12.6
PACSIN3-209ENST00000532457 EFCAB14O75071 495 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 CCDC175P0C221 793 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 FAM189BP81408 668 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 NAB2Q15742 525 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 NOP9Q86U38 636 aaKnown RBP23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 DNAAF5Q86Y56 855 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 BEST2Q8NFU1 509 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 SLC30A5Q8TAD4 765 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 LNX1Q8TBB1 728 aaPredicted RBP23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 TAF4BQ92750 862 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 SDCBP2Q9H190 292 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 VRTNQ9H8Y1 702 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 UBQLN1Q9UMX0 589 aaKnown RBP23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 CNTN6Q9UQ52 1028 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 GIT1Q9Y2X7 761 aa23.53■■□□□ 1.36
PACSIN3-209ENST00000532457 CLSTN1O94985 981 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 ACRP10323 421 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 KRT5P13647 590 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 CHRNB2P17787 502 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 TBXAS1P24557 533 aaPredicted RBP23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 ATICP31939 592 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 CDH8P55286 799 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 C9orf57Q5W0N0 161 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 SCARA5Q6ZMJ2 495 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 FAM81BQ96LP2 452 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 PCDH10Q9P2E7 1040 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 CACNG4Q9UBN1 327 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 NOCTQ9UK39 431 aaKnown RBP23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 ABHD14A-ACY1A0A1B0GW23 586 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 PIRO00625 290 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 BAIAP3O94812 1187 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 ARHGAP25P42331 645 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 RAP1GAPP47736 663 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 RAB27AP51159 221 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 SLC18A3Q16572 532 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 JAKMIP2Q96AA8 810 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 VWCEQ96DN2 955 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 NENFQ9UMX5 172 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 PCDHB4Q9Y5E5 795 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 PCDHA13Q9Y5I0 950 aa23.52■■□□□ 1.36
PACSIN3-209ENST00000532457 ZSCAN12O43309 604 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 ZNF667Q5HYK9 610 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 SLC24A5Q71RS6 500 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 PALB2Q86YC2 1186 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 GLYCTKQ8IVS8 523 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 EPS8L1Q8TE68 723 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 DDX1Q92499 740 aaKnown RBP23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 TSPAN18Q96SJ8 248 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 BCO2Q9BYV7 579 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 LACRTQ9GZZ8 138 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 TSPYL2Q9H2G4 693 aaPredicted RBP23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 MTIF3Q9H2K0 278 aaKnown RBP23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 CISHQ9NSE2 258 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 TRIM10Q9UDY6 481 aa23.51■■□□□ 1.35
PACSIN3-209ENST00000532457 ENPP3O14638 875 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 CD58P19256 250 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 SCNN1GP51170 649 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 TMEM270Q6UE05 265 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 ZNF365Q70YC5 407 aa23.5■■□□□ 1.35
PACSIN3-209ENST00000532457 C16orf59Q7L2K0 433 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms