RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 AFF1P51825 1210 aaKnown RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 COPB1P53618 953 aaKnown RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 RNASELQ05823 741 aaKnown RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 CETN1Q12798 172 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 GLRA4Q5JXX5 417 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 SV2AQ7L0J3 742 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 APTXQ7Z2E3 356 aaKnown RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 TRAPPC11Q7Z392 1133 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 LRRC52Q8N7C0 313 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 OR5B17Q8NGF7 314 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 TSC1Q92574 1164 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 FAXDC2Q96IV6 333 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 FAM193BQ96PV7 902 aaPredicted RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 MTMR12Q9C0I1 747 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 NDST4Q9H3R1 872 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 PLAGL2Q9UPG8 496 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 PCDHA11Q9Y5I1 949 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 TDRD15B5MCY1 1934 aaKnown RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 PIRO00625 290 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 POMCP01189 267 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 ATP1A3P13637 1013 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 LAG3P18627 525 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
COPB1-208ENST00000532088 RBP5P82980 135 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 BTG3Q14201 252 aaPredicted RBP13.48□□□□□ -0.25
COPB1-208ENST00000532088 TDRD10Q5VZ19 366 aaKnown RBP13.48□□□□□ -0.25
COPB1-208ENST00000532088 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 RNF214Q8ND24 703 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 TAF4BQ92750 862 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 CLP1Q92989 425 aaKnown RBP13.48□□□□□ -0.25
COPB1-208ENST00000532088 POP1Q99575 1024 aaKnown RBP13.48□□□□□ -0.25
COPB1-208ENST00000532088 CXCL16Q9H2A7 254 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 CWH43Q9H720 699 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 VRTNQ9H8Y1 702 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 STK39Q9UEW8 545 aa13.48□□□□□ -0.25
COPB1-208ENST00000532088 TRIP11Q15643 1979 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 A0A1B0GTH6 734 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 LGALS16A8MUM7 142 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 RBAK-RBAKDNI3L0D1 243 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.252e-10■■■■□ 19.9
COPB1-208ENST00000532088 DDHD2O94830 711 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 SERPINC1P01008 464 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 GGCXP38435 758 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 GCLMP48507 274 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 GATMP50440 423 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 FANCCQ00597 558 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 MYL7Q01449 175 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 SOX4Q06945 474 aaPredicted RBP13.47□□□□□ -0.25
COPB1-208ENST00000532088 RAB30Q15771 203 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 UPP1Q16831 310 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 PTPRNQ16849 979 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 CBWD6Q4V339 395 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 CBWD3Q5JTY5 395 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 CBWD5Q5RIA9 395 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 FKBP15Q5T1M5 1219 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 DCLRE1AQ6PJP8 1040 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 CREBRFQ8IUR6 639 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 FBXL13Q8NEE6 735 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
COPB1-208ENST00000532088 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 FAM124BQ9H5Z6 455 aaPredicted RBP13.47□□□□□ -0.25
COPB1-208ENST00000532088 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 TAB2Q9NYJ8 693 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 TUBGCP4Q9UGJ1 667 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 SIX4Q9UIU6 781 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
COPB1-208ENST00000532088 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
COPB1-208ENST00000532088 PODXLO00592 558 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 CBFA2T2O43439 604 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 PHACTR2O75167 634 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 ALDH2P05091 517 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 ITGB3P05106 788 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 TPM3P06753 285 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 GALTP07902 379 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 PPM1AP35813 382 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.25
COPB1-208ENST00000532088 SMAD3P84022 425 aaKnown RBP13.46□□□□□ -0.25
COPB1-208ENST00000532088 BIRC3Q13489 604 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 TRPC3Q13507 836 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 NCOA4Q13772 614 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 EPC2Q52LR7 807 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 LMBRD2Q68DH5 695 aaPredicted RBP13.46□□□□□ -0.25
COPB1-208ENST00000532088 FAM117BQ6P1L5 589 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
COPB1-208ENST00000532088 ZNF280BQ86YH2 543 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms