RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 INSL5Q9Y5Q6 135 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
CD44-232ENST00000531118 V9GY48 417 aaPredicted RBP9.12□□□□□ -0.95
CD44-232ENST00000531118 PLXNB3Q9ULL4 1909 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 GON4LQ3T8J9 2241 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 EIF4E1BA6NMX2 242 aaKnown RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 CYSRT1A8MQ03 144 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 INO80B-WBP1J3KQ70 363 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 PTGESO14684 152 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 CHADO15335 359 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 B4GALT5O43286 388 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 EDIL3O43854 480 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 CAVIN2O95810 425 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 CAPNS1P04632 268 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 PRKCBP05771 671 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 GSPT1P15170 499 aaKnown RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 TKTP29401 623 aaKnown RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 PTENP60484 403 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 PSMC5P62195 406 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 MBTD1Q05BQ5 628 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 FCHO2Q0JRZ9 810 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 KARSQ15046 597 aaKnown RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 NAB2Q15742 525 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 PFKFB3Q16875 520 aaPredicted RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 SLC27A1Q6PCB7 646 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 CDR2LQ86X02 465 aaPredicted RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 RALGPS2Q86X27 583 aaPredicted RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 TSC1Q92574 1164 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 ZMYND12Q9H0C1 365 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 C6orf50Q9HD87 102 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
CD44-232ENST00000531118 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 BACE2Q9Y5Z0 518 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 ADAMTS9Q9P2N4 1935 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
CD44-232ENST00000531118 ZNF462Q96JM2 2506 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 GOLGA8AA7E2F4 631 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 GOLGA8BA8MQT2 603 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 TMEM189-UBE2V1I3L0A0 370 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 CDX4O14627 284 aaPredicted RBP9.1□□□□□ -0.95
CD44-232ENST00000531118 PRRG1O14668 218 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 CCNYL3P0C7X3 344 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 GJA1P17302 382 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 CAPSQ13938 189 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 TEAD2Q15562 447 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 UAP1L1Q3KQV9 507 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 CYP4A22Q5TCH4 519 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 SLC8B1Q6J4K2 584 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 ANKS3Q6ZW76 656 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 TTC8Q8TAM2 541 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 SHKBP1Q8TBC3 707 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 CCDC12Q8WUD4 166 aaPredicted RBP9.1□□□□□ -0.95
CD44-232ENST00000531118 TCP11Q8WWU5 503 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 RUFY2Q8WXA3 655 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 CEP170P1Q96L14 293 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 HHIPQ96QV1 700 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 SLITRK6Q9H5Y7 841 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 SLC8A2Q9UPR5 921 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 OBSL1O75147 1896 aa9.1□□□□□ -0.95
CD44-232ENST00000531118 ZNF638Q14966 1978 aaKnown RBP9.1□□□□□ -0.95
CD44-232ENST00000531118 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 CITO14578 2027 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 SPTA1P02549 2419 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 SPAARA0A1B0GVQ0 90 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 PATE3B3GLJ2 98 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 KHNYNO15037 678 aaKnown RBP9.09□□□□□ -0.95
CD44-232ENST00000531118 DCLK1O15075 740 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 SGSM2O43147 1006 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ASAP2O43150 1006 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ZBTB43O43298 467 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 AP1G2O75843 785 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 RHOBTB1O94844 696 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 SEC24AO95486 1093 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 TDP2O95551 362 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 MYL4P12829 197 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 CHMLP26374 656 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ELF1P32519 619 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 EPHA5P54756 1037 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 NUCB1Q02818 461 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 Q4G0T1 1027 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 PMS2CLQ68D20 193 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 SYNE3Q6ZMZ3 975 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 EXOC8Q8IYI6 725 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 TCEAL8Q8IYN2 117 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ELMOD1Q8N336 334 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ETNPPLQ8TBG4 499 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 E2F7Q96AV8 911 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 MKNK1Q9BUB5 465 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 CXCL16Q9H2A7 254 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 SLC32A1Q9H598 525 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 CYP4F11Q9HBI6 524 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 XPNPEP1Q9NQW7 623 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 ASAH2Q9NR71 780 aa9.09□□□□□ -0.95
CD44-232ENST00000531118 POLR3BQ9NW08 1133 aaPredicted RBP9.09□□□□□ -0.95
CD44-232ENST00000531118 SNTG2Q9NY99 539 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms