RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.44□□□□□ -0.58
SOX6-213ENST00000530378 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 NT5C1B-RDH14C9J2C7 533 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 MFAP3LO75121 409 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 WEE2P0C1S8 567 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 ASPAP45381 313 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 CDR1P51861 262 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 TUSC3Q13454 348 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 TOP1MTQ969P6 601 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 SPAG5Q96R06 1193 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 NIF3L1Q9GZT8 377 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 PLCB1Q9NQ66 1216 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 SNX9Q9Y5X1 595 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 PIRO00625 290 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 PMM2O15305 246 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 HOXA2O43364 376 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 DGKIO75912 1065 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 KIF4AO95239 1232 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 TPM1P09493 284 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 KRT5P13647 590 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 CYP3A5P20815 502 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 KRT9P35527 623 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 BRCC3P46736 316 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 CDH8P55286 799 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 TNNC1P63316 161 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 MYO1EQ12965 1108 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 CUL2Q13617 745 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 DRAP1Q14919 205 aaPredicted RBP11.43□□□□□ -0.58
SOX6-213ENST00000530378 SGSM1Q2NKQ1 1148 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 SPOUT1Q5T280 376 aaKnown RBP11.43□□□□□ -0.58
SOX6-213ENST00000530378 LRRC43Q8N309 656 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 TC2NQ8N9U0 490 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 BAP1Q92560 729 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 ZNF560Q96MR9 790 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
SOX6-213ENST00000530378 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 NRDE2Q9H7Z3 1164 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 ACP6Q9NPH0 428 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 LUC7L2Q9Y383 392 aaKnown RBP11.43□□□□□ -0.58
SOX6-213ENST00000530378 SLC4A7Q9Y6M7 1214 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 NLRC5Q86WI3 1866 aa11.43□□□□□ -0.58
SOX6-213ENST00000530378 VWA8A3KMH1 1905 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 GRXCR1A8MXD5 290 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 AKR1B15C9JRZ8 316 aaPredicted RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 F8VZ95 297 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 H0YGN5 161 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 DLL1O00548 723 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 INPPL1O15357 1258 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 HCRTO43612 131 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 EFCAB14O75071 495 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 B3GAT3O94766 335 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 GFPT2O94808 682 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 TAF6P49848 677 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 RABGGTBP53611 331 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 DSC1Q08554 894 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 TRIM14Q14142 442 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 BTG3Q14201 252 aaPredicted RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 UPP1Q16831 310 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 FAM109BQ6ICB4 259 aaPredicted RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 PDXDC1Q6P996 788 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 TMEM173Q86WV6 379 aaPredicted RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 COLGALT2Q8IYK4 626 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 NUP58Q9BVL2 599 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 NAA15Q9BXJ9 866 aaKnown RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 GPR88Q9GZN0 384 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 CHD7Q9P2D1 2997 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 HMGXB4Q9UGU5 601 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 CAPN11Q9UMQ6 739 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 TIMM13Q9Y5L4 95 aaPredicted RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 CSPG5O95196 566 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 SKILP12757 684 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 ATP2A2P16615 1042 aaKnown RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 LRPAP1P30533 357 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 SLC11A1P49279 550 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 LILRA4P59901 499 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 SHHQ15465 462 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 SV2CQ496J9 727 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 ZNF394Q53GI3 561 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 LRRC52Q8N7C0 313 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 HERVK_113Q902F9 699 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 B3GALT6Q96L58 329 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 PPP1R9BQ96SB3 815 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 MRPL45Q9BRJ2 306 aaKnown RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 MRPL9Q9BYD2 267 aaKnown RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
SOX6-213ENST00000530378 MRPL42Q9Y6G3 142 aaKnown RBP11.42□□□□□ -0.58
SOX6-213ENST00000530378 CHD9Q3L8U1 2897 aa11.41□□□□□ -0.58
SOX6-213ENST00000530378 LCHNA4D1U4 455 aa11.41□□□□□ -0.58
SOX6-213ENST00000530378 KPNA7A9QM74 516 aa11.41□□□□□ -0.58
SOX6-213ENST00000530378 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
SOX6-213ENST00000530378 MYOGP15173 224 aa11.41□□□□□ -0.58
SOX6-213ENST00000530378 ATICP31939 592 aa11.41□□□□□ -0.58
SOX6-213ENST00000530378 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms