RNA–Protein interactions for RNA: ENST00000530235.1

RBM4-211, Transcript of RNA binding motif protein 4, human

TSL 3 BASIC

Gene RBM4, Length 1,011 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-211	ENST00000530235	ATP2B1	P20020	1258 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	CTH	P32929	405 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	MPL	P40238	635 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	CTXN3	Q4LDR2	81 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	EARS2	Q5JPH6	523 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	DGKK	Q5KSL6	1271 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	CD300LG	Q6UXG3	332 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	CACNA2D4	Q7Z3S7	1137 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	DIS3L2	Q8IYB7	885 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	GAB3	Q8WWW8	586 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	RSPRY1	Q96DX4	576 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	MSANTD3	Q96H12	275 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	TMX3	Q96JJ7	454 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	ZFYVE19	Q96K21	471 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	C8orf76	Q96K31	380 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	NAP1L4	Q99733	375 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	LSM14B	Q9BX40	385 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	C2orf40	Q9H1Z8	148 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	GTSE1	Q9NYZ3	720 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	NUB1	Q9Y5A7	615 aa		13.92	□□□□□ -0.18
RBM4-211	ENST00000530235	WDFY3	Q8IZQ1	3526 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-211	ENST00000530235		H7C4K7	107 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	GIPC1	O14908	333 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	MOSPD3	O75425	235 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	LYPLA2	O95372	231 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	EDN1	P05305	212 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	ANP32A	P39687	249 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	MCM2	P49736	904 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	OSTN	P61366	133 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	SOX4	Q06945	474 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	ZNF252P-AS1	Q0IIN9	211 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	SAFB	Q15424	915 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	FAM187B	Q17R55	369 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	DCAF4L1	Q3SXM0	396 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	C1orf228	Q6PIY5	440 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	MCPH1	Q8NEM0	835 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	DEPTOR	Q8TB45	409 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	SHKBP1	Q8TBC3	707 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	BSND	Q8WZ55	320 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	LOXL4	Q96JB6	756 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	HSD17B14	Q9BPX1	270 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	KIFC3	Q9BVG8	833 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	FBXL5	Q9UKA1	691 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	PCDHA12	Q9UN75	941 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	NUP205	Q92621	2012 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	SETX	Q7Z333	2677 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-211	ENST00000530235	NBEA	Q8NFP9	2946 aa		13.91	□□□□□ -0.18
RBM4-211	ENST00000530235		A0A1W2PRU2	124 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	PODXL	O00592	558 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	DPYSL4	O14531	572 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	CHAD	O15335	359 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	CALCRL	Q16602	461 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	STXBP5	Q5T5C0	1151 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	TPGS2	Q68CL5	300 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	RALGPS2	Q86X27	583 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	LEMD2	Q8NC56	503 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	TNFRSF25	Q93038	417 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	E2F7	Q96AV8	911 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	EDEM2	Q9BV94	578 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	TRPV4	Q9HBA0	871 aa		13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	ZNF638	Q14966	1978 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	GCN1	Q92616	2671 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-211	ENST00000530235	SMIM28	A0A1B0GU29	152 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	MYBPHL	A2RUH7	354 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	C4orf47	A7E2U8	309 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	ACKR2	O00590	384 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	SYN3	O14994	580 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	TXK	P42681	527 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	RAP1GAP	P47736	663 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	YARS	P54577	528 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	TNK2	Q07912	1038 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	ATF7IP2	Q5U623	682 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	ZNF280D	Q6N043	979 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	PKN3	Q6P5Z2	889 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	HAUS6	Q7Z4H7	955 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	PGLYRP2	Q96PD5	576 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	TTC12	Q9H892	705 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	VPS45	Q9NRW7	570 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	SLC8A2	Q9UPR5	921 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	YIPF1	Q9Y548	306 aa		13.89	□□□□□ -0.19
RBM4-211	ENST00000530235	TOP3B	O95985	862 aa	Known RBP	13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	HOXA6	P31267	233 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	MCM4	P33991	863 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	MLLT6	P55198	1093 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	CREB5	Q02930	508 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	FCHO2	Q0JRZ9	810 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	GNL2	Q13823	731 aa	Known RBP	13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	CCIN	Q13939	588 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	RNF19B	Q6ZMZ0	732 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	CEP120	Q8N960	986 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	FBXO18	Q8NFZ0	1043 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	CCDC94	Q9BW85	323 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	ADAM33	Q9BZ11	813 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	GPR88	Q9GZN0	384 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	CCDC113	Q9H0I3	377 aa		13.88	□□□□□ -0.19
RBM4-211	ENST00000530235	POLD4	Q9HCU8	107 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms