RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LRRC24Q50LG9 513 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 CCDC62Q6P9F0 684 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 GPR155Q7Z3F1 870 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 FAM83AQ86UY5 434 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ZNF761Q86XN6 746 aaPredicted RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ERO1BQ86YB8 467 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 TMEM151BQ8IW70 566 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 STAG1Q8WVM7 1258 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 FERMT2Q96AC1 680 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 KAZALD1Q96I82 304 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 YTHDC1Q96MU7 727 aaKnown RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 SMAD5Q99717 465 aaKnown RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 MRIQ9BWK5 157 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ZCCHC17Q9NP64 241 aaKnown RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 KLHL42Q9P2K6 505 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 FTSJ1Q9UET6 329 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ZDHHC9Q9Y397 364 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 KIF16BQ96L93 1317 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ARAP2Q8WZ64 1704 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 LPLP06858 475 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 PLA2G5P39877 138 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 CACNB3P54284 484 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 RRADP55042 308 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 MANFP55145 182 aaKnown RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 SNAPC2Q13487 334 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 PUM3Q15397 648 aaKnown RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 SLC4A8Q2Y0W8 1093 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 SLC9C1Q4G0N8 1177 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 BRDTQ58F21 947 aaPredicted RBP6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 FKBP1CQ5VVH2 108 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 KIAA1841Q6NSI8 718 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 FAM9BQ8IZU0 186 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 FAM43AQ8N2R8 423 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ANKRD44Q8N8A2 993 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 ZNF333Q96JL9 665 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 TMEM168Q9H0V1 697 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 MTG2Q9H4K7 406 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 TRHDEQ9UKU6 1024 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 USP18Q9UMW8 372 aa6.2□□□□□ -1.42
AMBRA1-209ENST00000529963 PTPRCP08575 1304 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 OTOFQ9HC10 1997 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 BRCA2P51587 3418 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 TLR2O60603 784 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 TRIM13O60858 407 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 H2AFYO75367 372 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 ZSCAN22P10073 491 aaPredicted RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 SLC5A1P13866 664 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 ZEB1P37275 1124 aaPredicted RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 PRMT2P55345 433 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 ERVK-21P61565 698 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 CAP1Q01518 475 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 PPIL2Q13356 520 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 GRAMD4Q6IC98 578 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 APOBEC3HQ6NTF7 200 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 KANSL1Q7Z3B3 1105 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 NECAB2Q7Z6G3 386 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 FERMT3Q86UX7 667 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 VGLL2Q8N8G2 317 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 EAF2Q96CJ1 260 aaPredicted RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 ZNF341Q9BYN7 854 aa6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 PUS7LQ9H0K6 701 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 USP36Q9P275 1121 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 RPAP1Q9BWH6 1393 aaPredicted RBP6.19□□□□□ -1.42
AMBRA1-209ENST00000529963 COL6A3P12111 3177 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 ALG1L2C9J202 215 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 BTBD19C9JJ37 291 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 EYA2O00167 538 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 MT-CO1P00395 513 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 ZNF888P0CJ79 500 aaPredicted RBP6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 BMP7P18075 431 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 FGFR2P21802 821 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 PPATQ06203 517 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 ABCB5Q2M3G0 1257 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 CCDC181Q5TID7 509 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 LCNL1Q6ZST4 164 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 BCL6BQ8N143 479 aaPredicted RBP6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 ZSCAN18Q8TBC5 510 aaPredicted RBP6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 LMBR1Q8WVP7 490 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 LPIN2Q92539 896 aa6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 ZKSCAN4Q969J2 545 aaPredicted RBP6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 QRSL1Q9H0R6 528 aaKnown RBP6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 DDX56Q9NY93 547 aaKnown RBP6.18□□□□□ -1.42
AMBRA1-209ENST00000529963 MYPNQ86TC9 1320 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 ZNF521Q96K83 1311 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 A0A0G2JNJ9 132 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 CHGBP05060 677 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 CELA3BP08861 270 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 HOXD10P28358 340 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 KCNC1P48547 511 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 NFATC3Q12968 1075 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 TOP3AQ13472 1001 aaPredicted RBP6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 TRIM25Q14258 630 aaKnown RBP6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 PITRM1Q5JRX3 1037 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 NT5DC1Q5TFE4 455 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 Q6ZUG5 572 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 LARP4Q71RC2 724 aaKnown RBP eCLIP6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 MIGA2Q7L4E1 593 aa6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 CXXC5Q7LFL8 322 aaKnown RBP6.17□□□□□ -1.42
AMBRA1-209ENST00000529963 ANKRD23Q86SG2 305 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms