RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 GRM5P41594 1212 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 TXKP42681 527 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 NOVA1P51513 510 aaKnown RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 EPHB3P54753 998 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 SOX4Q06945 474 aaPredicted RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 SCRN1Q12765 414 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 MRPL58Q14197 206 aaKnown RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 PON2Q15165 354 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 PTPAQ15257 358 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 PLA2G2CQ5R387 149 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 KDF1Q8NAX2 398 aaPredicted RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 WASF1Q92558 559 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 NACC1Q96RE7 527 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 TM6SF1Q9BZW5 370 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 TUFT1Q9NNX1 390 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 RXFP3Q9NSD7 469 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 OBP2AQ9NY56 170 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 SLC8A2Q9UPR5 921 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 USP20Q9Y2K6 914 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 LARGE1O95461 756 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 CTDNEP1O95476 244 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 FGF19O95750 216 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 CYP11B2P19099 503 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 MARCKSP29966 332 aaPredicted RBP11.41□□□□□ -0.58
COPB1-207ENST00000529866 ZNF252P-AS1Q0IIN9 211 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 ELF2Q15723 593 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 ZNF568Q3ZCX4 644 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 ARHGAP15Q53QZ3 475 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 EARS2Q5JPH6 523 aaKnown RBP11.41□□□□□ -0.58
COPB1-207ENST00000529866 DAB2IPQ5VWQ8 1189 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 KBTBD6Q86V97 674 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 ARID3BQ8IVW6 561 aaPredicted RBP11.41□□□□□ -0.58
COPB1-207ENST00000529866 TTC8Q8TAM2 541 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 ERMNQ8TAM6 284 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 SUSD3Q96L08 255 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 EDEM2Q9BV94 578 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 OXCT2Q9BYC2 517 aaPredicted RBP11.41□□□□□ -0.58
COPB1-207ENST00000529866 PDRG1Q9NUG6 133 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 C2orf42Q9NWW7 574 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 GTSE1Q9NYZ3 720 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 TPCN1Q9ULQ1 816 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 TNFSF13BQ9Y275 285 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 VWA8A3KMH1 1905 aa11.41□□□□□ -0.58
COPB1-207ENST00000529866 PHLPP2Q6ZVD8 1323 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 A0A087WWV3 80 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 EXTL3O43909 919 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 EDN1P05305 212 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 KCNE1P15382 129 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 ALDH1A3P47895 512 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 PXNP49023 591 aaPredicted RBP11.4□□□□□ -0.58
COPB1-207ENST00000529866 GRSF1Q12849 480 aaKnown RBP eCLIP11.4□□□□□ -0.58
COPB1-207ENST00000529866 FOXC1Q12948 553 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 NR5A1Q13285 461 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 KARSQ15046 597 aaKnown RBP11.4□□□□□ -0.58
COPB1-207ENST00000529866 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 WDR44Q5JSH3 913 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 NT5DC1Q5TFE4 455 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 CATSPER3Q86XQ3 398 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 DDX12PQ92771 950 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 KIFAP3Q92845 792 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 RSPRY1Q96DX4 576 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 ZC3H10Q96K80 434 aaKnown RBP11.4□□□□□ -0.58
COPB1-207ENST00000529866 ACAP3Q96P50 834 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 TMEM209Q96SK2 561 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 ADAM33Q9BZ11 813 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 THG1LQ9NWX6 298 aaKnown RBP11.4□□□□□ -0.58
COPB1-207ENST00000529866 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 ASB3Q9Y575 518 aa11.4□□□□□ -0.58
COPB1-207ENST00000529866 ARID2Q68CP9 1835 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 SPEGQ15772 3267 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 K7ERI5 159 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 RHOBTB1O94844 696 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 COL4A2P08572 1712 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 SPATA31C1P0DKV0 1188 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 MCM2P49736 904 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 OSTNP61366 133 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 YWHAHQ04917 246 aaPredicted RBP11.39□□□□□ -0.59
COPB1-207ENST00000529866 ITPRIPL2Q3MIP1 535 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 PLK5Q496M5 336 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 ALKAL1Q6UXT8 129 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 TMC8Q8IU68 726 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 CAMKK1Q8N5S9 505 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 CEP120Q8N960 986 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 BPIFB1Q8TDL5 484 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 EXOC4Q96A65 974 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 ZFYVE19Q96K21 471 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 TBC1D32Q96NH3 1257 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 GCNAQ96QF7 691 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
COPB1-207ENST00000529866 MRPL4Q9BYD3 311 aaKnown RBP11.39□□□□□ -0.59
COPB1-207ENST00000529866 CDT1Q9H211 546 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms