RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 VITQ6UXI7 678 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 NYAP1Q6ZVC0 841 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 CENPQQ7L2Z9 268 aaPredicted RBP9.87□□□□□ -0.83
VPS11-203ENST00000529545 MFSD6LQ8IWD5 586 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
VPS11-203ENST00000529545 CCDC94Q9BW85 323 aaPredicted RBP9.87□□□□□ -0.83
VPS11-203ENST00000529545 CXCL16Q9H2A7 254 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 TUFT1Q9NNX1 390 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 ASAH2Q9NR71 780 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 F5P12259 2224 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 SMIM28A0A1B0GU29 152 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 HEPACAM2A8MVW5 462 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 PODXLO00592 558 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 GDF9O60383 454 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 PAPSS2O95340 614 aaPredicted RBP9.86□□□□□ -0.83
VPS11-203ENST00000529545 MARCKSP29966 332 aaPredicted RBP9.86□□□□□ -0.83
VPS11-203ENST00000529545 VIPR2P41587 438 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 CCR2P41597 374 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 LIMK1P53667 647 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 TWF1Q12792 350 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 PTGDRQ13258 359 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 NR5A1Q13285 461 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 PDCD11Q14690 1871 aaKnown RBP9.86□□□□□ -0.83
VPS11-203ENST00000529545 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
VPS11-203ENST00000529545 ZNF280DQ6N043 979 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 HAUS6Q7Z4H7 955 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 SKAP1Q86WV1 359 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 FAM160A2Q8N612 972 aaPredicted RBP9.86□□□□□ -0.83
VPS11-203ENST00000529545 C3orf58Q8NDZ4 430 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 APPL2Q8NEU8 664 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 ERMNQ8TAM6 284 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 ZSWIM3Q96MP5 696 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 TM6SF1Q9BZW5 370 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 CCDC113Q9H0I3 377 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 TRPV4Q9HBA0 871 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 GOLGA2P5Q9HBQ8 144 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 GJB4Q9NTQ9 266 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 PDRG1Q9NUG6 133 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 ORC3Q9UBD5 711 aaPredicted RBP9.86□□□□□ -0.83
VPS11-203ENST00000529545 FBXL5Q9UKA1 691 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 USP20Q9Y2K6 914 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 TRIP11Q15643 1979 aa9.86□□□□□ -0.83
VPS11-203ENST00000529545 SLC38A8A6NNN8 435 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 K7ERI5 159 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 CHADO15335 359 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 EPB41L2O43491 1005 aaKnown RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 SEC24AO95486 1093 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 CPB1P15086 417 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 CYP11B2P19099 503 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 IGFBP6P24592 240 aaPredicted RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 RPL9P32969 192 aaKnown RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 SCRN1Q12765 414 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 SRSF5Q13243 272 aaKnown RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 PLD1Q13393 1074 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 TEAD2Q15562 447 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 N4BP2L1Q5TBK1 243 aaPredicted RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 CD300LGQ6UXG3 332 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 RALGPS2Q86X27 583 aaPredicted RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 CATSPER3Q86XQ3 398 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 BSNDQ8WZ55 320 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 LOXL4Q96JB6 756 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 RBM12Q9NTZ6 932 aaKnown RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 AFF4Q9UHB7 1163 aaKnown RBP9.85□□□□□ -0.83
VPS11-203ENST00000529545 TNFSF13BQ9Y275 285 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 USP24Q9UPU5 2620 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 COL4A2P08572 1712 aa9.85□□□□□ -0.83
VPS11-203ENST00000529545 SPECC1L-ADORA2AF8WAN1 911 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 K7ESF4 209 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 AXIN1O15169 862 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 ZNF806P0C7X5 589 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 SPATA31C1P0DKV0 1188 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 GJA1P17302 382 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 PMLP29590 882 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 HOXA6P31267 233 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 MCM4P33991 863 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 GRM5P41594 1212 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 EPHB3P54753 998 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 EPHA5P54756 1037 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 OSTNP61366 133 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 SHC2P98077 582 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 SOX4Q06945 474 aaPredicted RBP9.84□□□□□ -0.83
VPS11-203ENST00000529545 TRIM29Q14134 588 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 MRPL58Q14197 206 aaKnown RBP9.84□□□□□ -0.83
VPS11-203ENST00000529545 GAS6Q14393 721 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 ZNF568Q3ZCX4 644 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 NT5DC1Q5TFE4 455 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 WDR5BQ86VZ2 330 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 SYNPOQ8N3V7 929 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 KIFAP3Q92845 792 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 ACAP3Q96P50 834 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 MTMR9Q96QG7 549 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 TCHPQ9BT92 498 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 POLR3CQ9BUI4 534 aaPredicted RBP9.84□□□□□ -0.83
VPS11-203ENST00000529545 ARRDC1-AS1Q9H2J1 176 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 CEP72Q9P209 647 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 CHD6Q8TD26 2715 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 GREB1Q4ZG55 1949 aa9.84□□□□□ -0.83
VPS11-203ENST00000529545 CACNA1GO43497 2377 aa9.83□□□□□ -0.84
VPS11-203ENST00000529545 PHLPP2Q6ZVD8 1323 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms