RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TPM1P09493 284 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 MAGEA10P43363 369 aaPredicted RBP26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 ASPAP45381 313 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 CDH8P55286 799 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 JAM2P57087 298 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 MYO1EQ12965 1108 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 CUL2Q13617 745 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 LRRC52Q8N7C0 313 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 TAF4BQ92750 862 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 SPAG5Q96R06 1193 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 STK33Q9BYT3 514 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 VRTNQ9H8Y1 702 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 SNX9Q9Y5X1 595 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 B3GAT3O94766 335 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 PBX3P40426 434 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 RAP1GAPP47736 663 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 GCNT1Q02742 428 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 HERVK_113Q902F9 699 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 ZNF689Q96CS4 500 aaPredicted RBP26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 ZNF830Q96NB3 372 aaPredicted RBP26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 FAM193BQ96PV7 902 aaPredicted RBP26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 NIF3L1Q9GZT8 377 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 SMYD3Q9H7B4 428 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 ABHD10Q9NUJ1 306 aa26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 RNF216Q9NWF9 866 aaPredicted RBP26.52■■□□□ 1.84
LDLRAD3-203ENST00000528989 KPNA7A9QM74 516 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 F8VZ95 297 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 RPL9P32969 192 aaKnown RBP26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 MFAP3P55082 362 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 ARID5AQ03989 594 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 PDXDC1Q6P996 788 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 CD300LGQ6UXG3 332 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 ZNF397Q8NF99 534 aaPredicted RBP26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 MMS19Q96T76 1030 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 EDEM3Q9BZQ6 932 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 SDCBP2Q9H190 292 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 GOLGA6L6A8MZA4 724 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 STAU1O95793 577 aaKnown RBP26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 OR1G1P47890 313 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 TAF6P49848 677 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 C9orf50Q5SZB4 431 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 CNGA4Q8IV77 575 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 OR8K1Q8NGG5 319 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 IQCDQ96DY2 449 aa26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 RC3H2Q9HBD1 1191 aaKnown RBP26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 PRG3Q9Y2Y8 225 aaPredicted RBP26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 TDRD15B5MCY1 1934 aaKnown RBP26.51■■□□□ 1.83
LDLRAD3-203ENST00000528989 TNRC18O15417 2968 aaPredicted RBP26.5■■□□□ 1.83
LDLRAD3-203ENST00000528989 CD58P19256 250 aa26.5■■□□□ 1.83
LDLRAD3-203ENST00000528989 DNAJC7Q99615 494 aa26.5■■□□□ 1.83
LDLRAD3-203ENST00000528989 I3L4J1 428 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 KIF4AO95239 1232 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 RFX1P22670 979 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 USP8P40818 1118 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 WDR59Q6PJI9 974 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 DDX27Q96GQ7 796 aaKnown RBP26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 ZNF560Q96MR9 790 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 ACP6Q9NPH0 428 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 COL4A6Q14031 1691 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 NT5C1B-RDH14C9J2C7 533 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 GFPT2O94808 682 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 ACO1P21399 889 aaKnown RBP26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 PNPLA4P41247 253 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 GSDMDP57764 484 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 TNNC1P63316 161 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 LRRC8AQ8IWT6 810 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 SHC3Q92529 594 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 MRPL9Q9BYD2 267 aaKnown RBP26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 BCO2Q9BYV7 579 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 SLC4A7Q9Y6M7 1214 aa26.49■■□□□ 1.83
LDLRAD3-203ENST00000528989 NRP1O14786 923 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 GJB5O95377 273 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 CALCAP01258 141 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 TBXAS1P24557 533 aaPredicted RBP26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 BRCC3P46736 316 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 SOWAHAQ2M3V2 549 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 TIGD5Q53EQ6 642 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 LRRC43Q8N309 656 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 YME1L1Q96TA2 773 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 CWH43Q9H720 699 aa26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 FNDC1Q4ZHG4 1894 aaPredicted RBP26.48■■□□□ 1.83
LDLRAD3-203ENST00000528989 SKILP12757 684 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 SLC11A1P49279 550 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 SV2CQ496J9 727 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 SFMBT2Q5VUG0 894 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 DCLRE1AQ6PJP8 1040 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 ENOSF1Q7L5Y1 443 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 UROC1Q96N76 676 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 CISHQ9NSE2 258 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 GDAP2Q9NXN4 497 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 ALDH2P05091 517 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 SOX5P35711 763 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 BTG3Q14201 252 aaPredicted RBP26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 ZNF394Q53GI3 561 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 IRF2BP2Q7Z5L9 587 aa26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 TMEM173Q86WV6 379 aaPredicted RBP26.47■■□□□ 1.83
LDLRAD3-203ENST00000528989 PTPRSQ13332 1948 aa26.46■■□□□ 1.83
LDLRAD3-203ENST00000528989 CYP26A1O43174 497 aa26.46■■□□□ 1.83
LDLRAD3-203ENST00000528989 GALTP07902 379 aa26.46■■□□□ 1.83
LDLRAD3-203ENST00000528989 KRT5P13647 590 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms