RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 STAG3L1P0CL83 205 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 PRKCIP41743 596 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 MFAP3P55082 362 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 SLC8A3P57103 927 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 ADAM17P78536 824 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 FAM187BQ17R55 369 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 TLDC1Q6P9B6 456 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 TMEM40Q8WWA1 233 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 GCOM2Q9BZD3 368 aaPredicted RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 CPSF2Q9P2I0 782 aaKnown RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 SALL4Q9UJQ4 1053 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 MGAMO43451 1857 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 TTC36A6NLP5 189 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 GOLGA8KD6RF30 607 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 DDX3XO00571 662 aaKnown RBP eCLIP13.66□□□□□ -0.222e-9■■■□□ 18.6
ATG13-211ENST00000528494 BUB1O43683 1085 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 KRT5P13647 590 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 RFX1P22670 979 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 NCOA4Q13772 614 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 RNF187Q5TA31 235 aaPredicted RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 ALKBH5Q6P6C2 394 aaKnown RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 ZNF410Q86VK4 478 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 U2AF1L4Q8WU68 220 aaKnown RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 GDAP1L1Q96MZ0 367 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 MTG1Q9BT17 334 aaPredicted RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
ATG13-211ENST00000528494 KIF9Q9HAQ2 790 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 C1orf112Q9NSG2 853 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 NAGPAQ9UK23 515 aa13.66□□□□□ -0.22
ATG13-211ENST00000528494 TARSL2A2RTX5 802 aaKnown RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 MOCS3O95396 460 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 SGPL1O95470 568 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 ASGR1P07306 291 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 KCNA10Q16322 511 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 ZC3H12AQ5D1E8 599 aaKnown RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 SLC47A2Q86VL8 602 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 PALB2Q86YC2 1186 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 PARP9Q8IXQ6 854 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 LNX1Q8TBB1 728 aaPredicted RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 VTI1AQ96AJ9 217 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 APOBEC3GQ9HC16 384 aaKnown RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 SIP14410 1827 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 UMODL1Q5DID0 1318 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 EME2A4GXA9 379 aaPredicted RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 SKAP2O75563 359 aaPredicted RBP13.65□□□□□ -0.22
ATG13-211ENST00000528494 HOXD10P28358 340 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 SKOR1P84550 965 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 DUOXA2Q1HG44 320 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 TRAPPC11Q7Z392 1133 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 RNF19AQ9NV58 838 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 HES2Q9Y543 173 aa13.65□□□□□ -0.22
ATG13-211ENST00000528494 LACTBL1A8MY62 500 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 ADAMTS4O75173 837 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 KRT19P08727 400 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 GNAT1P11488 350 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 TNFAIP3P21580 790 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 EIF4BP23588 611 aaKnown RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 HOXA11P31270 313 aaPredicted RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 SLC8A1P32418 973 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 MYO1AQ9UBC5 1043 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 NUB1Q9Y5A7 615 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 CAPN6Q9Y6Q1 641 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 NPTXRO95502 500 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 NFICP08651 508 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 MCF2P10911 925 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 DARSP14868 501 aaKnown RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 MYL6P60660 151 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 ENPEPQ07075 957 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 FAM71AQ8IYT1 594 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 KIRREL3Q8IZU9 778 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 MICAL1Q8TDZ2 1067 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 ZNF296Q8WUU4 475 aaPredicted RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 SHC3Q92529 594 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 RSRC1Q96IZ7 334 aaKnown RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 ADPGKQ9BRR6 497 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
ATG13-211ENST00000528494 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 BATF3Q9NR55 127 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 TAS2R14Q9NYV8 317 aa13.64□□□□□ -0.23
ATG13-211ENST00000528494 TRIP12Q14669 1992 aaPredicted RBP13.63□□□□□ -0.23
ATG13-211ENST00000528494 GOLGA6L7A0A1B0GV03 622 aa13.63□□□□□ -0.23
ATG13-211ENST00000528494 OPA1O60313 960 aa13.63□□□□□ -0.23
ATG13-211ENST00000528494 HMGCRP04035 888 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms