RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TMEM110-MUSTN1A8MSY1 372 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 EIF3FO00303 357 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 MAP2K7O14733 419 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 FOXP2O15409 715 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 ZEB2O60315 1214 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 MFAP3LO75121 409 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 MBD4O95243 580 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 RPSAP08865 295 aaKnown RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 SRGAP2CP0DJJ0 459 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 MYCLP1P12525 358 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 ZFP36P26651 326 aaKnown RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 SDHAP31040 664 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 AMPHP49418 695 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 CCT8P50990 548 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 GNAI1P63096 354 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 GUCY1A3Q02108 690 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 TCIRG1Q13488 830 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 CUL4BQ13620 913 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 PTPN14Q15678 1187 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 CNGA3Q16281 694 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 TPD52L1Q16890 204 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 CCDC152Q4G0S7 254 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 ARHGAP29Q52LW3 1261 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 PLEKHG4Q58EX7 1191 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 CC2D1AQ6P1N0 951 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 RD3Q7Z3Z2 195 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 UBE2Q1Q7Z7E8 422 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 PDILTQ8N807 584 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 FAM71BQ8TC56 605 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 CDK5RAP3Q96JB5 506 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 FUT8Q9BYC5 575 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 LRRCC1Q9C099 1032 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 R3HDMLQ9H3Y0 253 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 PRDM13Q9H4Q3 707 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 RPAP3Q9H6T3 665 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 ZWILCHQ9H900 591 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 IFT57Q9NWB7 429 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 SAE1Q9UBE0 346 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 TUBGCP4Q9UGJ1 667 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 DENND2AQ9ULE3 1009 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 TTLL3Q9Y4R7 772 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 FAM169AQ9Y6X4 670 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 KIF7Q2M1P5 1343 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 ANKRD30BQ9BXX2 1392 aa4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 ZNF608Q9ULD9 1512 aaPredicted RBP4.09□□□□□ -1.75
CLNS1A-209ENST00000527299 RTL1A6NKG5 1358 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ENO4A6NNW6 628 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 GOLGA8BA8MQT2 603 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 EFCAB8A8MWE9 144 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 H3BQF6 201 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 M0R2C6 588 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 EBAG9O00559 213 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 SCDO00767 359 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 KDM1AO60341 852 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ZBED4O75132 1171 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 WDHD1O75717 1129 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 RASSF9O75901 435 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 IPO13O94829 963 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 FGRP09769 529 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 VSIG10L2P0DP72 767 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 TGFB3P10600 412 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ENPP1P22413 925 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 TCF7P36402 384 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ARHGAP25P42331 645 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 CSE1LP55060 971 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ALDH6A1Q02252 535 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 MECOMQ03112 1051 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 DRP2Q13474 957 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 EIF4A2Q14240 407 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 BRD3Q15059 726 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 RCN1Q15293 331 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ERCC6LQ2NKX8 1250 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 USH1GQ495M9 461 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 FAM47CQ5HY64 1035 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 SAMD9Q5K651 1589 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 CEP85LQ5SZL2 805 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 CCDC183Q5T5S1 534 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 CCDC18Q5T9S5 1454 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 THEMIS2Q5TEJ8 643 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 FSTL4Q6MZW2 842 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ATF7IPQ6VMQ6 1270 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 Q6YL49 198 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 YTHDF3Q7Z739 585 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 LCA5Q86VQ0 697 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ARHGEF25Q86VW2 580 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 CXorf67Q86X51 503 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 LMNTD2Q8IXW0 634 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 RPAP2Q8IXW5 612 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 MB21D1Q8N884 522 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ZBTB8BQ8NAP8 495 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 C1orf131Q8NDD1 294 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 KLHDC4Q8TBB5 520 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 HNRNPLLQ8WVV9 542 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 DLG3Q92796 817 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 NKD2Q969F2 451 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 PPP2R3CQ969Q6 453 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 MAML3Q96JK9 1138 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 C16orf92Q96LL3 132 aa4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ZNF512Q96ME7 567 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-209ENST00000527299 ARAP1Q96P48 1450 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms