RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CST3P01034 146 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-203ENST00000527275 SKIP12755 728 aa20.16■□□□□ 0.82
SMPD1-203ENST00000527275 DRAP1Q14919 205 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-203ENST00000527275 XKR4Q5GH76 650 aa20.16■□□□□ 0.82
SMPD1-203ENST00000527275 PHLDB3Q6NSJ2 640 aa20.16■□□□□ 0.82
SMPD1-203ENST00000527275 ZNF598Q86UK7 904 aaKnown RBP20.16■□□□□ 0.82
SMPD1-203ENST00000527275 GSTCDQ8NEC7 633 aa20.16■□□□□ 0.82
SMPD1-203ENST00000527275 HLA-DRAP01903 254 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 TNNC2P02585 160 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 SOX5P35711 763 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 ZBTB6Q15916 424 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 ERCC6LQ2NKX8 1250 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 PI4K2AQ9BTU6 479 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 ARL5CA6NH57 179 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 F8VZ95 297 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 GFPT2O94808 682 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 PNMA6AP0CW24 399 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-203ENST00000527275 GUCY2FP51841 1108 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 FAM189BP81408 668 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 NCOA4Q13772 614 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 MFSD5Q6N075 450 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 NT5DC4Q86YG4 428 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 C1orf127Q8N9H9 656 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 C1orf112Q9NSG2 853 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 GIT1Q9Y2X7 761 aa20.15■□□□□ 0.82
SMPD1-203ENST00000527275 RALGAPA2Q2PPJ7 1873 aa20.14■□□□□ 0.82
SMPD1-203ENST00000527275 EFCAB8A8MWE9 144 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 PTGESO14684 152 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 TACC1O75410 805 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 TADA3O75528 432 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 KCNE1P15382 129 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 RFX1P22670 979 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 RFC2P35250 354 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 PIK3CAP42336 1068 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 ELF2Q15723 593 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 C18orf25Q96B23 403 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-203ENST00000527275 PGBD4Q96DM1 585 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 RSAD1Q9HA92 442 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 DERAQ9Y315 318 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-203ENST00000527275 ENC1O14682 589 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 EVI5O60447 810 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 EOMESO95936 686 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 KRT19P08727 400 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 ANXA13P27216 316 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 AMPD2Q01433 879 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 TRIM58Q8NG06 486 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 UBXN4Q92575 508 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 GPR88Q9GZN0 384 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 DPP3Q9NY33 737 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 PRKAG2Q9UGJ0 569 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 TUBGCP4Q9UGJ1 667 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 SIX4Q9UIU6 781 aa20.14■□□□□ 0.81
SMPD1-203ENST00000527275 CCDC85CA6NKD9 419 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 MOCS3O95396 460 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 ITGB3P05106 788 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 ARHGAP44Q17R89 818 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 C10orf76Q5T2E6 689 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 VPS36Q86VN1 386 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 FMNL3Q8IVF7 1028 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 C7orf61Q8IZ16 206 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 TMEM199Q8N511 208 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 CXorf38Q8TB03 319 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 UBE2TQ9NPD8 197 aaPredicted RBP20.13■□□□□ 0.81
SMPD1-203ENST00000527275 MIOSQ9NXC5 875 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 TTC3P53804 2025 aa20.13■□□□□ 0.81
SMPD1-203ENST00000527275 ATP1A1P05023 1023 aaKnown RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 MYL6P60660 151 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 PAPD7Q5XG87 772 aaKnown RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 CNKSR3Q6P9H4 555 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 RNF10Q8N5U6 811 aaKnown RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 RPS6KC1Q96S38 1066 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 CCDC172P0C7W6 258 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 SOX4Q06945 474 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 TRPC3Q13507 836 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 IKBKEQ14164 716 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 SPOPLQ6IQ16 392 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 FAM43BQ6ZT52 329 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 CEP112Q8N8E3 955 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 PPP1R10Q96QC0 940 aaKnown RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 UBN1Q9NPG3 1134 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 TMEM161AQ9NX61 479 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 SALL4Q9UJQ4 1053 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 UBQLN1Q9UMX0 589 aaKnown RBP20.12■□□□□ 0.81
SMPD1-203ENST00000527275 CAPN6Q9Y6Q1 641 aa20.12■□□□□ 0.81
SMPD1-203ENST00000527275 PDCD11Q14690 1871 aaKnown RBP20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ANO9A1A5B4 782 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 FGFR1P11362 822 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 SCNN1GP51170 649 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 NAB2Q15742 525 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 WHAMMP3Q1A5X7 153 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ARHGEF19Q8IW93 802 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 TATDN2Q93075 761 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 TSPAN18Q96SJ8 248 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 GOLGA2P5Q9HBQ8 144 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 NAGPAQ9UK23 515 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 INPP5FQ9Y2H2 1132 aa20.11■□□□□ 0.81
SMPD1-203ENST00000527275 FOXN3O00409 490 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ASS1P00966 412 aaKnown RBP20.11■□□□□ 0.81
SMPD1-203ENST00000527275 ACRP10323 421 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms