RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FOXC1Q12948 553 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.49
NEDD8-204ENST00000526430 CAPSQ13938 189 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 DHX8Q14562 1220 aaKnown RBP11.96□□□□□ -0.49
NEDD8-204ENST00000526430 USP41Q3LFD5 358 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 LIN9Q5TKA1 542 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 GPBP1Q86WP2 473 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-204ENST00000526430 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 IQUBQ8NA54 791 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 SLC7A3Q8WY07 619 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 REEP2Q9BRK0 252 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 FDXACB1Q9BRP7 624 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-204ENST00000526430 LMAN1LQ9HAT1 526 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 TRPV5Q9NQA5 729 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 FAM13BQ9NYF5 915 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 GDE1Q9NZC3 331 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 ACACAQ13085 2346 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 KLRC4O43908 158 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 NR1I2O75469 434 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 POMCP01189 267 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 CHRNB1P11230 501 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 SYKP43405 635 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 RAP1GAPP47736 663 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 OR1G1P47890 313 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 POU5F1BQ06416 359 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 EHHADHQ08426 723 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 GAS6Q14393 721 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 SOWAHCQ53LP3 525 aaPredicted RBP11.95□□□□□ -0.5
NEDD8-204ENST00000526430 PPM1LQ5SGD2 360 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 KRBA2Q6ZNG9 492 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 CEP68Q76N32 757 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 SV2BQ7L1I2 683 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 DYMQ7RTS9 669 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 TAS1R3Q7RTX0 852 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 RHPN2Q8IUC4 686 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 EXOC8Q8IYI6 725 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 MCPH1Q8NEM0 835 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 FAM3CQ92520 227 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 DDX12PQ92771 950 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 ELSPBP1Q96BH3 223 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 SCNM1Q9BWG6 230 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 POLR3FQ9H1D9 316 aaPredicted RBP11.95□□□□□ -0.5
NEDD8-204ENST00000526430 ARRDC1-AS1Q9H2J1 176 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 CUEDC2Q9H467 287 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 UBN1Q9NPG3 1134 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 AGPAT5Q9NUQ2 364 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 KCND2Q9NZV8 630 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 PCDHGA5Q9Y5G8 931 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 COL4A3BPQ9Y5P4 624 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 ATG2BQ96BY7 2078 aa11.95□□□□□ -0.5
NEDD8-204ENST00000526430 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 ASAP2O43150 1006 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 C8AP07357 584 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 TXLNAP40222 546 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 PI4KAP42356 2102 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 MLLT6P55198 1093 aaPredicted RBP11.94□□□□□ -0.5
NEDD8-204ENST00000526430 PTENP60484 403 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 CUL4BQ13620 913 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 AMHR2Q16671 573 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 RNF43Q68DV7 783 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 FUT10Q6P4F1 479 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 RTL10Q7L3V2 364 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 WDR5BQ86VZ2 330 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 GLYCTKQ8IVS8 523 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 RNF149Q8NC42 400 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 TCP11Q8WWU5 503 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
NEDD8-204ENST00000526430 KCNN1Q92952 543 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
NEDD8-204ENST00000526430 GPR62Q9BZJ7 368 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 PLA2G2FQ9BZM2 168 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 BLZF1Q9H2G9 400 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 TNMDQ9H2S6 317 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 MYH11P35749 1972 aa11.94□□□□□ -0.5
NEDD8-204ENST00000526430 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 GIPC1O14908 333 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 AXIN1O15169 862 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 RPL17P18621 184 aaKnown RBP11.93□□□□□ -0.5
NEDD8-204ENST00000526430 SPINK2P20155 84 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-204ENST00000526430 AFMP43652 599 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 NPTX2P47972 431 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 DNM2P50570 870 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 UBE2HP62256 183 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 MXD4Q14582 209 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-204ENST00000526430 UVSSAQ2YD98 709 aa11.93□□□□□ -0.5
NEDD8-204ENST00000526430 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
NEDD8-204ENST00000526430 CDCA2Q69YH5 1023 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms