RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 LSM14BQ9BX40 385 aaKnown RBP8.26□□□□□ -1.09
NEDD8-203ENST00000524927 TEX13BQ9BXU2 312 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 FOXP3Q9BZS1 431 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 POMKQ9H5K3 350 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 TBC1D17Q9HA65 648 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 GPRC5CQ9NQ84 441 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 SFMBT1Q9UHJ3 866 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 TCFL5Q9UL49 500 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 RAB23Q9ULC3 237 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 FLT1P17948 1338 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
NEDD8-203ENST00000524927 SCG5P05408 212 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 ITGB1P05556 798 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF853P0CG23 659 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 JUNBP17275 347 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-203ENST00000524927 PTGS1P23219 599 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 GUCY1A2P33402 732 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 TECP42680 631 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 GABREP78334 506 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 RBM10P98175 930 aaKnown RBP8.25□□□□□ -1.09
NEDD8-203ENST00000524927 ITIH3Q06033 890 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 BNIP3Q12983 259 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 KCNC3Q14003 757 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF124Q15973 351 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 COL28A1Q2UY09 1125 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 CES5AQ6NT32 575 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 G2E3Q7L622 706 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 SESTD1Q86VW0 696 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 MAPKAPK5Q8IW41 473 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 C8orf58Q8NAV2 365 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 SPATA18Q8TC71 538 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 BCL7CQ8WUZ0 217 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-203ENST00000524927 POF1BQ8WVV4 589 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 NSUN4Q96CB9 384 aaKnown RBP8.25□□□□□ -1.09
NEDD8-203ENST00000524927 MFSD3Q96ES6 412 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 CLUHP3Q96NS8 147 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 SLC12A9Q9BXP2 914 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 SNX11Q9Y5W9 270 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 ADGRA3Q8IWK6 1321 aa8.25□□□□□ -1.09
NEDD8-203ENST00000524927 PARP14Q460N5 1801 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 ASB14A6NK59 587 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 J3QKU1 62 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 PER2O15055 1255 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 LAMTOR5O43504 91 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 THBDP07204 575 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 MMP3P08254 477 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 MTHFRP42898 656 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 DUSP28Q4G0W2 176 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 KIAA1755Q5JYT7 1200 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 TAPT1Q6NXT6 567 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 PROSER1Q86XN7 944 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 ANKRD35Q8N283 1001 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 PTPRN2Q92932 1015 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 NOL10Q9BSC4 688 aaKnown RBP8.24□□□□□ -1.09
NEDD8-203ENST00000524927 CDADC1Q9BWV3 514 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 ADAM7Q9H2U9 754 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 SEMA3GQ9NS98 782 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 SERPINB13Q9UIV8 391 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 COL4A3BPQ9Y5P4 624 aa8.24□□□□□ -1.09
NEDD8-203ENST00000524927 FREM2Q5SZK8 3169 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF205O95201 554 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 BAG3O95817 575 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 APPP05067 770 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 MYCLP1P12525 358 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-203ENST00000524927 PHKA1P46020 1223 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 CSTF1Q05048 431 aaKnown RBP8.23□□□□□ -1.09
NEDD8-203ENST00000524927 SEPT2Q15019 361 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 CCDC6Q16204 474 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 NTRK3Q16288 839 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 SLC35F1Q5T1Q4 408 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 SNRNP48Q6IEG0 339 aaKnown RBP8.23□□□□□ -1.09
NEDD8-203ENST00000524927 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 TGFBRAP1Q8WUH2 860 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 COPS5Q92905 334 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 GPATCH3Q96I76 525 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 HRASLS5Q96KN8 279 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 SCNM1Q9BWG6 230 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 APOL5Q9BWW9 433 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 FAM126AQ9BYI3 521 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-203ENST00000524927 RC3H2Q9HBD1 1191 aaKnown RBP8.23□□□□□ -1.09
NEDD8-203ENST00000524927 ATP13A1Q9HD20 1204 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 PDGFCQ9NRA1 345 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 RIPK3Q9Y572 518 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 ASXL3Q9C0F0 2248 aa8.23□□□□□ -1.09
NEDD8-203ENST00000524927 MEFVO15553 781 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-203ENST00000524927 C1QL1O75973 258 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 GLULP15104 373 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 IGBP1P78318 339 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 CYP4F3Q08477 520 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 ATP2B3Q16720 1220 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 TRIM71Q2Q1W2 868 aaKnown RBP8.22□□□□□ -1.09
NEDD8-203ENST00000524927 GAB4Q2WGN9 574 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms