RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	HAL	P42357	657 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	ID4	P47928	161 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	SIM1	P81133	766 aa	Predicted RBP	5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	GRM3	Q14832	879 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	ALF	Q53S48	1182 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	KRTAP5-1	Q6L8H4	278 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	BRINP3	Q76B58	766 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	PLXDC1	Q8IUK5	500 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	ENAH	Q8N8S7	591 aa	Predicted RBP	5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	NEUROD6	Q96NK8	337 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	CDC6	Q99741	560 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	ELAC2	Q9BQ52	826 aa	Known RBP	5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	ZNF69	Q9UC07	566 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	FAM50B	Q9Y247	325 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	RNF17	Q9BXT8	1623 aa	Known RBP	5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	RTEL1-TNFRSF6B	F6WH68	1400 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	RGS12	O14924	1447 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	CFAP65	Q6ZU64	1925 aa	Known RBP	5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	TMEM2	Q9UHN6	1383 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	ANO9	A1A5B4	782 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	WDR91	A4D1P6	747 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	BRINP1	O60477	761 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	KPNA6	O60684	536 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	CRTAM	O95727	393 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	DDX6	P26196	483 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	RNASE9	P60153	205 aa	Known RBP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	RBM6	P78332	1123 aa	Known RBP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	ROM1	Q03395	351 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	GBX1	Q14549	363 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	PTPN21	Q16825	1174 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	TRIM61	Q5EBN2	209 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	CCDC70	Q6NSX1	233 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	TOGARAM2	Q6ZUX3	1019 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	DEFB132	Q7Z7B7	95 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	FAM83A	Q86UY5	434 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	SYT12	Q8IV01	421 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	CPXCR1	Q8N123	301 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	CBARP	Q8N350	705 aa	Predicted RBP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	C1orf131	Q8NDD1	294 aa	Known RBP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	MTFR1L	Q9H019	292 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	PLCB1	Q9NQ66	1216 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	ANLN	Q9NQW6	1124 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	ZBTB21	Q9ULJ3	1066 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	COQ6	Q9Y2Z9	468 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	LUC7L2	Q9Y383	392 aa	Known RBP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	TNPO3	Q9Y5L0	923 aa	Known RBP	5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	MAST3	O60307	1309 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	ERVK-7	P63135	1459 aa		5.2	□□□□□ -1.58
PCM1-223	ENST00000524356	FZD9	O00144	591 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	NEMP1	O14524	444 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	PRKD3	O94806	890 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	BPI	P17213	487 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	ZNF280A	P59817	542 aa	Predicted RBP	5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	KCTD2	Q14681	263 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	ZNF169	Q14929	603 aa	Predicted RBP	5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	KLHL22	Q53GT1	634 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	COBLL1	Q53SF7	1204 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	SLFN12L	Q6IEE8	588 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	XRRA1	Q6P2D8	792 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	CCDC174	Q6PII3	467 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	BMP8A	Q7Z5Y6	402 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	FGD2	Q7Z6J4	655 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	AHI1	Q8N157	1196 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	PDILT	Q8N807	584 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	SPATA3	Q8NHX4	192 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	GJA10	Q969M2	543 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	ZBTB9	Q96C00	473 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	KMT5A	Q9NQR1	393 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	ACSS2	Q9NR19	701 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	DDX20	Q9UHI6	824 aa	Known RBP	5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	GTF2A1L	Q9UNN4	478 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	SPEF1	Q9Y4P9	236 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	KAT6B	Q8WYB5	2073 aa		5.19	□□□□□ -1.58
PCM1-223	ENST00000524356	TET3	O43151	1660 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	KDM5D	Q9BY66	1539 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	EEA1	Q15075	1411 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	MARCH11	A6NNE9	402 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	TRIM38	O00635	465 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PMM2	O15305	246 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	EPB41L2	O43491	1005 aa	Known RBP	5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	NPTXR	O95502	500 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PF4V1	P10720	104 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PHKG2	P15735	406 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	NAT1	P18440	290 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	IARS	P41252	1262 aa	Known RBP	5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	NEK4	P51957	841 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PROK1	P58294	105 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	SAFB	Q15424	915 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	SLC4A8	Q2Y0W8	1093 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	MINDY4	Q4G0A6	757 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	CCDC184	Q52MB2	194 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PDCD4	Q53EL6	469 aa	Known RBP	5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	DOK3	Q7L591	496 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	PARD3B	Q8TEW8	1205 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	MAML3	Q96JK9	1138 aa		5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	CDC5L	Q99459	802 aa	Known RBP	5.18	□□□□□ -1.58
PCM1-223	ENST00000524356	TTC1	Q99614	292 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms