RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PDIA5Q14554 519 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 KRT79Q5XKE5 535 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 TTC8Q8TAM2 541 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 SHKBP1Q8TBC3 707 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 CSGALNACT1Q8TDX6 532 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 PCDHB8Q9UN66 801 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 LIMCH1Q9UPQ0 1083 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 YIPF1Q9Y548 306 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 PCDHB6Q9Y5E3 794 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.29■■■□□ 2.12
PVT1-219ENST00000523427 A0A1W2PRU2 124 aa28.28■■■□□ 2.12
PVT1-219ENST00000523427 CXCL12P48061 93 aa28.28■■■□□ 2.12
PVT1-219ENST00000523427 TRAPPC10P48553 1259 aa28.28■■■□□ 2.12
PVT1-219ENST00000523427 KCNK18Q7Z418 384 aa28.28■■■□□ 2.12
PVT1-219ENST00000523427 MFSD6LQ8IWD5 586 aa28.28■■■□□ 2.12
PVT1-219ENST00000523427 RBM12Q9NTZ6 932 aaKnown RBP28.28■■■□□ 2.12
PVT1-219ENST00000523427 STK24Q9Y6E0 443 aa28.28■■■□□ 2.12
PVT1-219ENST00000523427 SLC38A8A6NNN8 435 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 CHRNB1P11230 501 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 SOX9P48436 509 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 KPNA1P52294 538 aaPredicted RBP28.27■■■□□ 2.12
PVT1-219ENST00000523427 YWHAHQ04917 246 aaPredicted RBP28.27■■■□□ 2.12
PVT1-219ENST00000523427 NOLC1Q14978 699 aaKnown RBP eCLIP28.27■■■□□ 2.126e-11■■■■□ 21.2
PVT1-219ENST00000523427 HEATR6Q6AI08 1181 aaKnown RBP28.27■■■□□ 2.12
PVT1-219ENST00000523427 C1orf186Q6ZWK4 172 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 IGSF22Q8N9C0 903 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 LEMD2Q8NC56 503 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 RSPRY1Q96DX4 576 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 TICRRQ7Z2Z1 1910 aa28.27■■■□□ 2.12
PVT1-219ENST00000523427 CHURC1-FNTBB4DL54 471 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 TOM1L1O75674 476 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 KRT37O76014 449 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 CXCL8P10145 99 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 FNTBP49356 437 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 DMWDQ09019 674 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 DUSP4Q13115 394 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 SRSF5Q13243 272 aaKnown RBP28.26■■■□□ 2.11
PVT1-219ENST00000523427 SIM2Q14190 667 aaPredicted RBP28.26■■■□□ 2.11
PVT1-219ENST00000523427 GAS6Q14393 721 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 USP37Q86T82 979 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 CELF5Q8N6W0 485 aaKnown RBP28.26■■■□□ 2.11
PVT1-219ENST00000523427 PLIN2Q99541 437 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 RTKNQ9BST9 563 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 TRPV5Q9NQA5 729 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 CITO14578 2027 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 ACACBO00763 2458 aa28.26■■■□□ 2.11
PVT1-219ENST00000523427 TOB1P50616 345 aaPredicted RBP28.25■■■□□ 2.11
PVT1-219ENST00000523427 EPHA5P54756 1037 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 IL17AQ16552 155 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 STXBP5Q5T5C0 1151 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 LAIR1Q6GTX8 287 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 KIF12Q96FN5 646 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 LLPHQ9BRT6 129 aaKnown RBP28.25■■■□□ 2.11
PVT1-219ENST00000523427 CRISPLD1Q9H336 500 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 SLC27A5Q9Y2P5 690 aa28.25■■■□□ 2.11
PVT1-219ENST00000523427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.24■■■□□ 2.11
PVT1-219ENST00000523427 CLDN3O15551 220 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 KCNA4P22459 653 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 GUCY2FP51841 1108 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 CDR1P51861 262 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 DSTYKQ6XUX3 929 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 BICD1Q96G01 975 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 IER2Q9BTL4 223 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 TRPV4Q9HBA0 871 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 MAFFQ9ULX9 164 aa28.24■■■□□ 2.11
PVT1-219ENST00000523427 VNN2O95498 520 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 ALDH1A3P47895 512 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 SMTNP53814 917 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 EPHB3P54753 998 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 DTHD1Q6ZMT9 781 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 MAMSTRQ6ZN01 415 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 ZFYVE19Q96K21 471 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 GPR88Q9GZN0 384 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 C17orf75Q9HAS0 396 aa28.23■■■□□ 2.11
PVT1-219ENST00000523427 ARNTLO00327 626 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 HRO43593 1189 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 RETP07949 1114 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 PLS3P13797 630 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 HMGN5P82970 282 aaKnown RBP28.22■■■□□ 2.11
PVT1-219ENST00000523427 CACNB1Q02641 598 aaPredicted RBP28.22■■■□□ 2.11
PVT1-219ENST00000523427 Q6ZS52 159 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 ARID3BQ8IVW6 561 aaPredicted RBP28.22■■■□□ 2.11
PVT1-219ENST00000523427 TMEM161BQ8NDZ6 487 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 FAM200AQ8TCP9 573 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 E2F7Q96AV8 911 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 MMTAG2Q9BU76 263 aaKnown RBP28.22■■■□□ 2.11
PVT1-219ENST00000523427 DNAJC25Q9H1X3 360 aa28.22■■■□□ 2.11
PVT1-219ENST00000523427 M0QZQ0 153 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 DPYSL4O14531 572 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 SOAT2O75908 522 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 OAZ2O95190 189 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 SEC24BO95487 1268 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 MAPTP10636 758 aaKnown RBP28.21■■■□□ 2.11
PVT1-219ENST00000523427 TNFSF9P41273 254 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 PLD1Q13393 1074 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 LRRC32Q14392 662 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.21■■■□□ 2.11
PVT1-219ENST00000523427 TMC8Q8IU68 726 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 SPEM1Q8N4L4 309 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 ATAD1Q8NBU5 361 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms