RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 GPR75-ASB3A0A0A6YYF3 556 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 ZBTB39O15060 712 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 PIAS1O75925 651 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 CD19P15391 556 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 GEMIN4P57678 1058 aaKnown RBP9.52□□□□□ -0.88
CSMD1-212ENST00000523387 GRAPQ13588 217 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 WDR78Q5VTH9 848 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 DNAJC24Q6P3W2 148 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 RFWD3Q6PCD5 774 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 C4orf50Q6ZRC1 276 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 DPH6Q7L8W6 267 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 SLC25A41Q8N5S1 370 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 PPM1NQ8N819 430 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 GRAPLQ8TC17 118 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-212ENST00000523387 TCP10LQ8TDR4 215 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 DHX38Q92620 1227 aaKnown RBP9.52□□□□□ -0.88
CSMD1-212ENST00000523387 ACAP3Q96P50 834 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 POLR3CQ9BUI4 534 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-212ENST00000523387 FAM192AQ9GZU8 254 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 BCAS3Q9H6U6 928 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 TXNDC16Q9P2K2 825 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 SLC4A7Q9Y6M7 1214 aa9.52□□□□□ -0.88
CSMD1-212ENST00000523387 ETS2P15036 469 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 CACNB3P54284 484 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 HSPA2P54652 639 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 DLG4P78352 724 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 ASPHQ12797 758 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 DMP1Q13316 513 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-212ENST00000523387 HIC1Q14526 733 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 DSTYKQ6XUX3 929 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 HAUS6Q7Z4H7 955 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 SCUBE1Q8IWY4 988 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 TEKT1Q969V4 418 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 ALKBH8Q96BT7 664 aaKnown RBP9.52□□□□□ -0.89
CSMD1-212ENST00000523387 NMD3Q96D46 503 aaKnown RBP9.52□□□□□ -0.89
CSMD1-212ENST00000523387 WWP1Q9H0M0 922 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 MAD1L1Q9Y6D9 718 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 SCINQ9Y6U3 715 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 PIK3CDO00329 1044 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 FCHO1O14526 889 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 FSCN2O14926 492 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 NFIXQ14938 502 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 RASA2Q15283 850 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 TRIP10Q15642 601 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 CCNG2Q16589 344 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 SYCP2LQ5T4T6 812 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 CLNKQ7Z7G1 428 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 LRRC6Q86X45 466 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 RFX6Q8HWS3 928 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 ARID3BQ8IVW6 561 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-212ENST00000523387 FAM81AQ8TBF8 368 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 PPP4R1Q8TF05 950 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 PI4K2AQ9BTU6 479 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 KCNMB3Q9NPA1 279 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 FBXO6Q9NRD1 293 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-212ENST00000523387 ARL8BQ9NVJ2 186 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 AKAP11Q9UKA4 1901 aa9.52□□□□□ -0.89
CSMD1-212ENST00000523387 A6NHS1 94 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 EML1O00423 815 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ZSCAN5DPP0CG00 497 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ALCAMQ13740 583 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 SLC1A5Q15758 541 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 DNAL1Q4LDG9 190 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 CASC4Q6P4E1 433 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ASRGL1Q7L266 308 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 GSDMBQ8TAX9 411 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 DCAF4Q8WV16 495 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ZWILCHQ9H900 591 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ZNF212Q9UDV6 495 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 TISP43B9A030 160 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 FAM86B1E9PN63 330 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 H7C0C1 242 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 MYCLP12524 364 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 NCF2P19878 526 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ATP5OP48047 213 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 PPP3CAQ08209 521 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ABCB5Q2M3G0 1257 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 TMEM270Q6UE05 265 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 PRPF39Q86UA1 669 aaKnown RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 NUDCD3Q8IVD9 361 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ZNF333Q96JL9 665 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 PCDHB18PQ96TA0 734 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 WDR35Q9P2L0 1181 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 RPL26L1Q9UNX3 145 aaKnown RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 CHMP2BQ9UQN3 213 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 R3HDM2Q9Y2K5 976 aaKnown RBP9.51□□□□□ -0.89
CSMD1-212ENST00000523387 DAGLAQ9Y4D2 1042 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 A0A1W2PPM1 405 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 F5H6K3 240 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 C2CD2LO14523 706 aa9.51□□□□□ -0.89
CSMD1-212ENST00000523387 P4HA2O15460 535 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms