RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RETP07949 1114 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 CPB1P15086 417 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 CXCL12P48061 93 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 NBR1Q14596 966 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 PRR23BQ6ZRT6 265 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 TMEM130Q8N3G9 435 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 TUBGCP4Q9UGJ1 667 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 YIPF1Q9Y548 306 aa24.83■■□□□ 1.57
PVT1-218ENST00000523328 LRP3O75074 770 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 HARSP12081 509 aaKnown RBP24.82■■□□□ 1.56
PVT1-218ENST00000523328 TRAPPC10P48553 1259 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 PTGDRQ13258 359 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 SEZ6Q53EL9 994 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 WDR44Q5JSH3 913 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 RINT1Q6NUQ1 792 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 DRC1Q96MC2 740 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 GPR88Q9GZN0 384 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 DNM3Q9UQ16 869 aa24.82■■□□□ 1.56
PVT1-218ENST00000523328 NUP210Q8TEM1 1887 aaPredicted RBP24.81■■□□□ 1.56
PVT1-218ENST00000523328 M0QZQ0 153 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 SLC30A4O14863 429 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 SLC16A4O15374 487 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 HRO43593 1189 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 ADRB1P08588 477 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 DMWDQ09019 674 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 C1orf186Q6ZWK4 172 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 TMC8Q8IU68 726 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 SPEM1Q8N4L4 309 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 FBXO18Q8NFZ0 1043 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 NETO1Q8TDF5 533 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 E2F7Q96AV8 911 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 NTPCRQ9BSD7 190 aaKnown RBP24.81■■□□□ 1.56
PVT1-218ENST00000523328 DNAJC25Q9H1X3 360 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 CRISPLD1Q9H336 500 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 SLITRK6Q9H5Y7 841 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 C17orf75Q9HAS0 396 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 STK24Q9Y6E0 443 aa24.81■■□□□ 1.56
PVT1-218ENST00000523328 CHD8Q9HCK8 2581 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 PP2D1A8MPX8 630 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 CHADO15335 359 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 TOM1L1O75674 476 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 OAZ2O95190 189 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 PAPSS2O95340 614 aaPredicted RBP24.8■■□□□ 1.56
PVT1-218ENST00000523328 MARCKSP29966 332 aaPredicted RBP24.8■■□□□ 1.56
PVT1-218ENST00000523328 FCHO2Q0JRZ9 810 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 SIM2Q14190 667 aaPredicted RBP24.8■■□□□ 1.56
PVT1-218ENST00000523328 NOLC1Q14978 699 aaKnown RBP eCLIP24.8■■□□□ 1.56
PVT1-218ENST00000523328 CSGALNACT1Q8TDX6 532 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 MSANTD3Q96H12 275 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 SEMA4GQ9NTN9 838 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 RBM12Q9NTZ6 932 aaKnown RBP24.8■■□□□ 1.56
PVT1-218ENST00000523328 ANKFY1Q9P2R3 1169 aa24.8■■□□□ 1.56
PVT1-218ENST00000523328 A0A1W2PRU2 124 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 SFI1A8K8P3 1242 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 CHURC1-FNTBB4DL54 471 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 K7ESF4 209 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 OR4Q2P0C623 313 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 SOX9P48436 509 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 FNTBP49356 437 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 YWHAHQ04917 246 aaPredicted RBP24.79■■□□□ 1.56
PVT1-218ENST00000523328 C1orf228Q6PIY5 440 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 KCNK18Q7Z418 384 aa24.79■■□□□ 1.56
PVT1-218ENST00000523328 TIMM13Q9Y5L4 95 aaPredicted RBP24.79■■□□□ 1.56
PVT1-218ENST00000523328 KIF26AQ9ULI4 1882 aaPredicted RBP24.79■■□□□ 1.56
PVT1-218ENST00000523328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.78■■□□□ 1.56
PVT1-218ENST00000523328 SLC38A8A6NNN8 435 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 LRPAP1P30533 357 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 AARSP49588 968 aaKnown RBP eCLIP24.78■■□□□ 1.56
PVT1-218ENST00000523328 TOB1P50616 345 aaPredicted RBP24.78■■□□□ 1.56
PVT1-218ENST00000523328 SRSF5Q13243 272 aaKnown RBP24.78■■□□□ 1.56
PVT1-218ENST00000523328 LRRC32Q14392 662 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 CSRP2Q16527 193 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 STXBP5Q5T5C0 1151 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 TXNDC11Q6PKC3 985 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 PRR23CQ6ZRP0 262 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 Q6ZS52 159 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 CCDC83Q8IWF9 413 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 TMEM161BQ8NDZ6 487 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 SPIRE2Q8WWL2 714 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 PGLYRP2Q96PD5 576 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 MKNK1Q9BUB5 465 aa24.78■■□□□ 1.56
PVT1-218ENST00000523328 C8orf33Q9H7E9 229 aaPredicted RBP24.78■■□□□ 1.56
PVT1-218ENST00000523328 NOL7Q9UMY1 257 aaKnown RBP24.78■■□□□ 1.56
PVT1-218ENST00000523328 ANK1P16157 1881 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 MYBPHLA2RUH7 354 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 CXCL8P10145 99 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 CDC25AP30304 524 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 CNR2P34972 360 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 SPAG1Q07617 926 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 MCL1Q07820 350 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 STRN3Q13033 797 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 DUSP4Q13115 394 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 PLD1Q13393 1074 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 ZBTB6Q15916 424 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 IL17AQ16552 155 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 PPM1JQ5JR12 505 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 KRT79Q5XKE5 535 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 LONP2Q86WA8 852 aa24.77■■□□□ 1.56
PVT1-218ENST00000523328 ARID3BQ8IVW6 561 aaPredicted RBP24.77■■□□□ 1.56
PVT1-218ENST00000523328 YAF2Q8IY57 180 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms