RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 LRP3O75074 770 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 TGM1P22735 817 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 CDC25AP30304 524 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 ABCD1P33897 745 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 FOSBP53539 338 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 SLC12A3P55017 1021 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 NCKAP1LP55160 1127 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 ARHGAP8P85298 464 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 POU5F1Q01860 360 aaKnown RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 CSTF1Q05048 431 aaKnown RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 STRN3Q13033 797 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 GPR17Q13304 367 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 PLD1Q13393 1074 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 IL17AQ16552 155 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 CTXN3Q4LDR2 81 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 VITQ6UXI7 678 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 DGLUCYQ7Z3D6 616 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 KCNK18Q7Z418 384 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 C18orf25Q96B23 403 aaPredicted RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 TCEAL4Q96EI5 215 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 AK8Q96MA6 479 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 ZNF512Q96ME7 567 aaPredicted RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 KIF2CQ99661 725 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 CORO1BQ9BR76 489 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 TCHPQ9BT92 498 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 LRRC3Q9BY71 257 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 BRD9Q9H8M2 597 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 POLD4Q9HCU8 107 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 OBP2AQ9NY56 170 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 CEP72Q9P209 647 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 LARSQ9P2J5 1176 aaKnown RBP10.25□□□□□ -0.77
SDC2-207ENST00000522911 ODF2LQ9ULJ1 636 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 ASB3Q9Y575 518 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 TRIP11Q15643 1979 aa10.25□□□□□ -0.77
SDC2-207ENST00000522911 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 CHADO15335 359 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 XPOTO43592 962 aaKnown RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 FGF19O95750 216 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 TYMPP19971 482 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 CD72P21854 359 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 HOXA6P31267 233 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 CCR3P51677 355 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 ZNF131P52739 623 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 OSTNP61366 133 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 LMNB2Q03252 620 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 YWHAHQ04917 246 aaPredicted RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 MTAPQ13126 283 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 MYBPC2Q14324 1141 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 NBR1Q14596 966 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 TMC8Q8IU68 726 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 CD302Q8IX05 232 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 CELF5Q8N6W0 485 aaKnown RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 ST13P5Q8NFI4 369 aaPredicted RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 ZBTB45Q96K62 511 aaPredicted RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 C8orf33Q9H7E9 229 aaPredicted RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 ASAH2Q9NR71 780 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 ZMYM5Q9UJ78 669 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 UBQLN1Q9UMX0 589 aaKnown RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 SMG5Q9UPR3 1016 aaKnown RBP10.24□□□□□ -0.77
SDC2-207ENST00000522911 CITO14578 2027 aa10.24□□□□□ -0.77
SDC2-207ENST00000522911 COL4A3Q01955 1670 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 PP2D1A8MPX8 630 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 SLC16A4O15374 487 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 SEC24BO95487 1268 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 VNN2O95498 520 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 CYP11A1P05108 521 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 CHRNB1P11230 501 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 MARCKSP29966 332 aaPredicted RBP10.23□□□□□ -0.77
SDC2-207ENST00000522911 MCM4P33991 863 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 CNR2P34972 360 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 TWF1Q12792 350 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 TMEM119Q4V9L6 283 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 DCLK2Q8N568 766 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 ZSWIM3Q96MP5 696 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 HAPLN2Q9GZV7 340 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 NCDNQ9UBB6 729 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 DERAQ9Y315 318 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 YIPF1Q9Y548 306 aa10.23□□□□□ -0.77
SDC2-207ENST00000522911 PDCD11Q14690 1871 aaKnown RBP10.23□□□□□ -0.77
SDC2-207ENST00000522911 A0A0B4J269 797 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
SDC2-207ENST00000522911 ANO9A1A5B4 782 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 NRG2O14511 850 aaPredicted RBP10.22□□□□□ -0.77
SDC2-207ENST00000522911 ZNF263O14978 683 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 OGTO15294 1046 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 FOXD2O60548 495 aaPredicted RBP10.22□□□□□ -0.77
SDC2-207ENST00000522911 CXCL8P10145 99 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 CPB1P15086 417 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 GDI1P31150 447 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 ARSHQ5FYA8 562 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 SPATA1Q5VX52 437 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 LAIR1Q6GTX8 287 aa10.22□□□□□ -0.77
SDC2-207ENST00000522911 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms