RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CIITAP33076 1130 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 FCHO2Q0JRZ9 810 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 C19orf57Q0VDD7 668 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 LAMTOR4Q0VGL1 99 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 SART3Q15020 963 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 B3GNT9Q6UX72 402 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 RALGPS2Q86X27 583 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 TEX2Q8IWB9 1127 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 SYNPOQ8N3V7 929 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 ZSCAN18Q8TBC5 510 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 FOXJ1Q92949 421 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 TMEM143Q96AN5 459 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 MSANTD3Q96H12 275 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 ZFYVE19Q96K21 471 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 CSRNP2Q9H175 543 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 CDY1Q9Y6F8 540 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 ATMQ13315 3056 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 SH2B2O14492 632 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 PTGESO14684 152 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 KHNYNO15037 678 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 SIAH2O43255 324 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 CHMP2AO43633 222 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 ABLIM3O94929 683 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 KPNA1P52294 538 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 NPEPPSP55786 919 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 SETQ01105 290 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 PTK2Q05397 1052 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 TNK2Q07912 1038 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 SPIRE1Q08AE8 756 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 GRIK3Q13003 919 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 SEMA3BQ13214 749 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 TUSC3Q13454 348 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 PLA2G4FQ68DD2 849 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 CDR2LQ86X02 465 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 MDM1Q8TC05 714 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 CSGALNACT1Q8TDX6 532 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 SLC5A5Q92911 643 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 PRM3Q9NNZ6 103 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 BARHL2Q9NY43 387 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 CEP72Q9P209 647 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 RCAN3Q9UKA8 241 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 INVSQ9Y283 1065 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 WASF2Q9Y6W5 498 aa9.87□□□□□ -0.83
TRAPPC9-212ENST00000521944 THADAQ6YHU6 1953 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 EIF4E1BA6NMX2 242 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 PSMD10O75832 226 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 ARF4P18085 180 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 EPHA5P54756 1037 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 TEAD2Q15562 447 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 FSTL4Q6MZW2 842 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 C1orf228Q6PIY5 440 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 CCNI2Q6ZMN8 369 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 RALYLQ86SE5 291 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 RNF149Q8NC42 400 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 ZNF461Q8TAF7 563 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 SHKBP1Q8TBC3 707 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 HHIPQ96QV1 700 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 RIT2Q99578 217 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 ARHGAP9Q9BRR9 750 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 MKNK1Q9BUB5 465 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 LNPKQ9C0E8 428 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 DHX33Q9H6R0 707 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 FBRSL1Q9HCM7 1045 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 DACH1Q9UI36 760 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 BACE2Q9Y5Z0 518 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 KNTC1P50748 2209 aa9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-212ENST00000521944 KIF26AQ9ULI4 1882 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 OTOL1A6NHN0 477 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 UPK3BL1B0FP48 263 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 UPK3BL2E5RIL1 263 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 ZNF197O14709 1029 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 B4GALT5O43286 388 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 RHOBTB1O94844 696 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 CALM1P0DP23 149 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 CALM2P0DP24 149 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 CALM3P0DP25 149 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 BCKDHBP21953 392 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 TKTP29401 623 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 SFNP31947 248 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 JAK3P52333 1124 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 PTENP60484 403 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 ROR1Q01973 937 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 ELF2Q15723 593 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 STXBP5Q5T5C0 1151 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 PMS2CLQ68D20 193 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 SLC8B1Q6J4K2 584 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 NOTUMQ6P988 496 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 TCEAL8Q8IYN2 117 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 CAMKK1Q8N5S9 505 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 DAGLBQ8NCG7 672 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 EXOC6Q8TAG9 804 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 CCDC51Q96ER9 411 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 LRRC3Q9BY71 257 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms