RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 CHD8Q9HCK8 2581 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TTC26A0AVF1 554 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 OR6C75A6NL08 312 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 H0YCG3 227 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 ZNF263O14978 683 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 HIP1RO75146 1068 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TYMPP19971 482 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 CCT6AP40227 531 aaKnown RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 LIMK1P53667 647 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 HMGN5P82970 282 aaKnown RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 POU5F1Q01860 360 aaKnown RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 ST3GAL1Q11201 340 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TWF1Q12792 350 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 LRRC32Q14392 662 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 GAS6Q14393 721 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 ZNF174Q15697 407 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 ZNF568Q3ZCX4 644 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 CTXN3Q4LDR2 81 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TTC38Q5R3I4 469 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 RINT1Q6NUQ1 792 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 LONP2Q86WA8 852 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 RALGPS2Q86X27 583 aaPredicted RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 TMC8Q8IU68 726 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 CEP120Q8N960 986 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 SHKBP1Q8TBC3 707 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 ZSCAN18Q8TBC5 510 aaPredicted RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 C8orf76Q96K31 380 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 CNTNAP3BQ96NU0 1288 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TARS2Q9BW92 718 aaKnown RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 CNTNAP3Q9BZ76 1288 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 DDX19AQ9NUU7 478 aaKnown RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 RAB23Q9ULC3 237 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 NUB1Q9Y5A7 615 aa9.3□□□□□ -0.92
SPARC-204ENST00000521569 TDRD15B5MCY1 1934 aaKnown RBP9.3□□□□□ -0.92
SPARC-204ENST00000521569 CHD6Q8TD26 2715 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 HEPACAM2A8MVW5 462 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 I3L4J1 428 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 K7ESF4 209 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 SLC26A4O43511 780 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 VNN2O95498 520 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 CLTAP09496 248 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
SPARC-204ENST00000521569 PLS3P13797 630 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
SPARC-204ENST00000521569 CDC25AP30304 524 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 GDI1P31150 447 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 NEK4P51957 841 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 SMTNP53814 917 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 PEX3P56589 373 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 SMARCB1Q12824 385 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 CCINQ13939 588 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 NOLC1Q14978 699 aaKnown RBP eCLIP9.29□□□□□ -0.92
SPARC-204ENST00000521569 KRT79Q5XKE5 535 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 TSSK4Q6SA08 328 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 RNF19BQ6ZMZ0 732 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 PSMG2Q969U7 264 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 C18orf25Q96B23 403 aaPredicted RBP9.29□□□□□ -0.92
SPARC-204ENST00000521569 MMTAG2Q9BU76 263 aaKnown RBP9.29□□□□□ -0.92
SPARC-204ENST00000521569 MKNK1Q9BUB5 465 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 DNAJC25Q9H1X3 360 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 KMT5AQ9NQR1 393 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 SEMA4GQ9NTN9 838 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 LIMCH1Q9UPQ0 1083 aa9.29□□□□□ -0.92
SPARC-204ENST00000521569 DOCK6Q96HP0 2047 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 TM4SF5O14894 197 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 CLDN3O15551 220 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 HRO43593 1189 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 FAM189A1O60320 539 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 AKAP3O75969 853 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 PIGRP01833 764 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 LIG1P18858 919 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 CCNE1P24864 410 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 VIPR2P41587 438 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
SPARC-204ENST00000521569 EPHB3P54753 998 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 SHC2P98077 582 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 SATB1Q01826 763 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 YWHAHQ04917 246 aaPredicted RBP9.28□□□□□ -0.92
SPARC-204ENST00000521569 GRM2Q14416 872 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 ARHGAP29Q52LW3 1261 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 CENPPQ6IPU0 288 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 GAREM2Q75VX8 874 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 WDR5BQ86VZ2 330 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 ARID3BQ8IVW6 561 aaPredicted RBP9.28□□□□□ -0.92
SPARC-204ENST00000521569 CD302Q8IX05 232 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 HS6ST3Q8IZP7 471 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 RUSC1Q9BVN2 902 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 USP18Q9UMW8 372 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 UBQLN1Q9UMX0 589 aaKnown RBP9.28□□□□□ -0.92
SPARC-204ENST00000521569 NOL7Q9UMY1 257 aaKnown RBP9.28□□□□□ -0.92
SPARC-204ENST00000521569 NDRG2Q9UN36 371 aaKnown RBP9.28□□□□□ -0.92
SPARC-204ENST00000521569 YIPF1Q9Y548 306 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 VWA8A3KMH1 1905 aa9.28□□□□□ -0.92
SPARC-204ENST00000521569 PATJQ8NI35 1801 aa9.27□□□□□ -0.93
SPARC-204ENST00000521569 DCDC2BA2VCK2 349 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms