RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SREBF1P36956 1147 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 MCAMP43121 646 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 GUCY1B3Q02153 619 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 ATP2B3Q16720 1220 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 BEAN1Q3B7T3 259 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 RNF187Q5TA31 235 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-209ENST00000521559 Q6ZVL8 140 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 BRINP3Q76B58 766 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 NECAB2Q7Z6G3 386 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 RNF169Q8NCN4 708 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 MLST8Q9BVC4 326 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 PUS7LQ9H0K6 701 aaKnown RBP4.21□□□□□ -1.74
VPS13B-209ENST00000521559 ZNF768Q9H5H4 540 aaKnown RBP4.21□□□□□ -1.74
VPS13B-209ENST00000521559 CCM2LQ9NUG4 571 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-209ENST00000521559 FAM30AQ9NZY2 134 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 SAP30BPQ9UHR5 308 aaKnown RBP4.21□□□□□ -1.74
VPS13B-209ENST00000521559 GPR45Q9Y5Y3 372 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 XRN1Q8IZH2 1706 aaKnown RBP4.21□□□□□ -1.74
VPS13B-209ENST00000521559 KIAA1210Q9ULL0 1709 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 TRPM1Q7Z4N2 1603 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 MST1RQ04912 1400 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 ANKARQ7Z5J8 1434 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 C1orf167Q5SNV9 1468 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 OVOL3O00110 214 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 RAP2AP10114 183 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 ATP5JP18859 108 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 KRT4P19013 534 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 DDX6P26196 483 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 MTNR1BP49286 362 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 CHN2P52757 468 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 FAM189BP81408 668 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 MGAT2Q10469 447 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 KLF1Q13351 362 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 PDCD4Q53EL6 469 aaKnown RBP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 FAM102AQ5T9C2 384 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 OTUD7BQ6GQQ9 843 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 Q6ZPA2 131 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 SYT12Q8IV01 421 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 RHOT2Q8IXI1 618 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 NGDNQ8NEJ9 315 aaKnown RBP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 REPS2Q8NFH8 660 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 SLC35B2Q8TB61 432 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 PHACTR3Q96KR7 559 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 MRI1Q9BV20 369 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 SLC12A5Q9H2X9 1139 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 TOR3AQ9H497 397 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 SERHL2Q9H4I8 314 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 SLC5A4Q9NY91 659 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 DNM3Q9UQ16 869 aa4.2□□□□□ -1.74
VPS13B-209ENST00000521559 USP15Q9Y4E8 981 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 SETD1AO15047 1707 aaKnown RBP4.2□□□□□ -1.74
VPS13B-209ENST00000521559 CHD2O14647 1828 aaKnown RBP4.19□□□□□ -1.74
VPS13B-209ENST00000521559 ATRNL1Q5VV63 1379 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 DISP3Q9P2K9 1392 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 TRIM75PA6NK02 468 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 HKR1P10072 659 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 ALAS1P13196 640 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 GUCY1A2P33402 732 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 RAP2BP61225 183 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 ERVK-21P61565 698 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 PPP3CAQ08209 521 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 UBXN2BQ14CS0 331 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 CSRP2Q16527 193 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 HECTD2Q5U5R9 776 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 ABHD17BQ5VST6 288 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 AGAP9Q5VTM2 703 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 AFMIDQ63HM1 303 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 LHFPL2Q6ZUX7 228 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 MED25Q71SY5 747 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 KRT28Q7Z3Y7 464 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 VRK3Q8IV63 474 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 DNAJC10Q8IXB1 793 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 CPEB3Q8NE35 698 aaKnown RBP4.19□□□□□ -1.74
VPS13B-209ENST00000521559 FUBP3Q96I24 572 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS13B-209ENST00000521559 COQ10AQ96MF6 247 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 AGAP2Q99490 1192 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 C7orf25Q9BPX7 421 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 WDR11Q9BZH6 1224 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 RNPEPQ9H4A4 650 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 RNF181Q9P0P0 153 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 ANKFY1Q9P2R3 1169 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 PCDHGA2Q9Y5H1 932 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 NOX1Q9Y5S8 564 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 STRCP1A6NGW2 1772 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 ACEP12821 1306 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 NPHP3Q7Z494 1330 aa4.19□□□□□ -1.74
VPS13B-209ENST00000521559 NINLQ9Y2I6 1382 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 PIPSLA2A3N6 862 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 ZNF185O15231 689 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 FOSP01100 380 aaPredicted RBP4.18□□□□□ -1.74
VPS13B-209ENST00000521559 OSMP13725 252 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 AGXTP21549 392 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 HSPA1LP34931 641 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 SLC16A1P53985 500 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 CREMQ03060 361 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 RESTQ13127 1097 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 CLUL1Q15846 466 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 ERCC6LQ2NKX8 1250 aa4.18□□□□□ -1.74
VPS13B-209ENST00000521559 TSHZ3Q63HK5 1081 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms