RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CHADO15335 359 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 FGF19O95750 216 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 KCNE1P15382 129 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 NPTX2P47972 431 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 SMTNP53814 917 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 MLLT6P55198 1093 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 SRSF5Q13243 272 aaKnown RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 PTGDRQ13258 359 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ZRSR1Q15695 479 aaKnown RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ME3Q16798 604 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 TTC38Q5R3I4 469 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ARMCX5Q6P1M9 558 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ALKAL1Q6UXT8 129 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 RNF19BQ6ZMZ0 732 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 RALGPS2Q86X27 583 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 BICD1Q96G01 975 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ATXN3LQ9H3M9 355 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 RBM12Q9NTZ6 932 aaKnown RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 THG1LQ9NWX6 298 aaKnown RBP12.55□□□□□ -0.4
MRPS28-206ENST00000520946 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 YIPF1Q9Y548 306 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 NOTCH4Q99466 2003 aa12.55□□□□□ -0.4
MRPS28-206ENST00000520946 F5P12259 2224 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 SPECC1L-ADORA2AF8WAN1 911 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 SLC16A4O15374 487 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 JAK2O60674 1132 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 HIP1RO75146 1068 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 TDGF1P13385 188 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 SOX9P48436 509 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 ANAPC15P60006 121 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 MRPL58Q14197 206 aaKnown RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 PON2Q15165 354 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 ARHGAP29Q52LW3 1261 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 XKR4Q5GH76 650 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 KRT79Q5XKE5 535 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 POTEHQ6S545 545 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 ITIH5Q86UX2 942 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 FAM160A2Q8N612 972 aaPredicted RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 NSUN7Q8NE18 718 aaKnown RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 SHKBP1Q8TBC3 707 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 ZMAT2Q96NC0 199 aaKnown RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 TRPV4Q9HBA0 871 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
MRPS28-206ENST00000520946 TIMM13Q9Y5L4 95 aaPredicted RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
MRPS28-206ENST00000520946 OR6C75A6NL08 312 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 SHISA7A6NL88 538 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 CLDN3O15551 220 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 GDF9O60383 454 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 NEK4P51957 841 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 DUSP4Q13115 394 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
MRPS28-206ENST00000520946 VEPH1Q14D04 833 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 GPR158Q5T848 1215 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 SYNPOQ8N3V7 929 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 ARRDC1-AS1Q9H2J1 176 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 SLC8A2Q9UPR5 921 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 SLC27A5Q9Y2P5 690 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 ASB3Q9Y575 518 aa12.53□□□□□ -0.4
MRPS28-206ENST00000520946 DMDP11532 3685 aa12.52□□□□□ -0.4
MRPS28-206ENST00000520946 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.4
MRPS28-206ENST00000520946 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 NRG2O14511 850 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 ATG13O75143 517 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 TOM1L1O75674 476 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 RPP40O75818 363 aaKnown RBP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 OR4Q2P0C623 313 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 GABRR2P28476 465 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 CTHP32929 405 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 EPHA5P54756 1037 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 AMPD2Q01433 879 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 PPP2R3AQ06190 1150 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 SPAG1Q07617 926 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 GRSF1Q12849 480 aaKnown RBP eCLIP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 SEZ6Q53EL9 994 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 OVOS1Q6IE37 1185 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 Q6ZS52 159 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 CACNA2D4Q7Z3S7 1137 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 EXOC4Q96A65 974 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 ZBTB45Q96K62 511 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-206ENST00000520946 PLEKHA5Q9HAU0 1116 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 PTPRHQ9HD43 1115 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms